Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits

被引:2
|
作者
Panda, Debabrata [1 ]
Mishra, Swati S. [1 ]
Mohanty, Sangram K. [2 ]
Behera, Prafulla K. [1 ]
Lenka, Sangram K. [3 ]
机构
[1] Cent Univ Orissa, Dept Biodivers & Conservat Nat Resources, Koraput 764021, Odisha, India
[2] Natl Rice Res Inst ICAR, Cuttack 753006, Odisha, India
[3] TERI Deakin NanoBiotechnol Ctr, Energy & Resources Inst, Gurugram 122001, Haryana, India
来源
DATA IN BRIEF | 2019年 / 25卷
关键词
Drought tolerance; Indigenous rice; Simple sequence repeat; Microsatellite panel;
D O I
10.1016/j.dib.2019.104363
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Precise physiological and molecular marker-based assessment provides information about the extent of genetic diversity, which helps for effective breeding programmes. We have conducted detailed physiological and molecular marker-based assessment of selected eight indigenous rice landraces from Koraput, India along with tolerant (N22) and susceptible (IR64) check varieties under control and simulated drought stress using polyethylene glycol (PEG) 6000. After exposure to different levels of drought stress, relative germination performance (RGP), seedling vigour index (SVI) and relative growth index (RGI) were significantly declined in all the rice landraces compared to the control plants and significant varietal differences were observed. Genetic relationship among the studied rice landraces was assessed with 24 previously reported drought tolerance linked Simple Sequence Repeat (SSR) markers. A total of 53 alleles were detected at the loci of the 24 markers across the 10 rice accessions. The Nei's gene diversity (He) and the polymorphism information content (PIC) ranged from 0 to 0.665 and 0 to 0.687, respectively. Six SSR loci, RM276, RM411, RM3, RM263, RM216 and RM28199, provided the highest PIC values and are potential for exploring the genetic diversity of studied rice lines for drought tolerance. Four rice genotypes (Butkichudi, Haldichudi, Machakanta and Kalajeera) showed the highest genetic distance with tolerant check variety (N22) and can be considered as valuable genetic resources for drought breeding program. (c) 2019 The Author(s). Published by Elsevier Inc. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
引用
收藏
页数:9
相关论文
共 50 条
  • [31] Genetic variability for and tolerance to anaerobic germination in rice (Oryza sativa L.)
    Darko Asante, Maxwell
    Ipinyomi, Samuel Oluwasegun
    Abe, Ayodeji
    Adjah, Kossi Lorimpo
    Aculey, Phyllis
    Kwame Bam, Raphael
    Manneh, Baboucarr
    JOURNAL OF CROP IMPROVEMENT, 2021, 35 (06) : 832 - 847
  • [32] Biochemical, Anatomical, Genetic, and Yield Assessment of Seven Rice Genotypes (Oryza sativa L.) Subjected to Drought Stress
    Abo-Youssef, Mahmoud I.
    Elbagory, Mohssen
    Elsehely, Abdelsalam B.
    El-Gammaal, Amgad A.
    El Denary, Medhat E.
    Abd Elaty, Mohamed S.
    Talha, Ibrahim A.
    Hazman, Mohamed
    Nehela, Yasser
    Omara, Alaa El-Dein
    El-Kallawy, Wael H.
    AGRONOMY-BASEL, 2023, 13 (10):
  • [33] Identification of Drought Tolerant Rice (Oryza Sativa L.) Genotypes with Asian and African Backgrounds
    Ndikuryayo, Cyprien
    Ndayiragije, Alexis
    Kilasi, Newton Lwiyiso
    Kusolwa, Paul
    PLANTS-BASEL, 2023, 12 (04):
  • [34] Genotypic variation of photosynthetic gas exchange and stomatal traits in some traditional rice (Oryza sativa L.) landraces from Koraput, India for crop improvement
    Panda, Debabrata
    Mahakhud, Amar
    Mohanty, Biswajeet
    Mishra, Swati S.
    Barik, Jijnasa
    PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS, 2018, 24 (05) : 973 - 983
  • [35] Assessment of genetic diversity of upland rice (Oryza sativa L.) genotypes from North Eastern Hill Region of India
    Syiemlieh P.
    Noren S.K.
    Khanna V.K.
    Rai M.
    Meetei N.T.
    Pattanayak A.
    Vegetos, 2019, 32 (3): : 407 - 419
  • [36] Genotypic variation of photosynthetic gas exchange and stomatal traits in some traditional rice (Oryza sativa L.) landraces from Koraput, India for crop improvement
    Debabrata Panda
    Amar Mahakhud
    Biswajeet Mohanty
    Swati S. Mishra
    Jijnasa Barik
    Physiology and Molecular Biology of Plants, 2018, 24 : 973 - 983
  • [37] Screening of Rice (Oryza sativa L.) Genotypes for Salinity Tolerance and Dissecting Determinants of Tolerance Mechanism
    Chen, Tianxiao
    Niu, Yanan
    Yang, Changdeng
    Liang, Yan
    Xu, Jianlong
    PLANTS-BASEL, 2024, 13 (07):
  • [38] Responses of rice (Oryza sativa L.) genotypes of submergence
    Afrin, Wazifa
    Nafis, Mahmudul Hassan
    Hossain, Muhammed Ali
    Islam, Mirza Mofazzal
    Hossain, Md. Amir
    COMPTES RENDUS BIOLOGIES, 2018, 341 (02) : 85 - 96
  • [39] Genetic diversity analyzed by quantitative traits among rice (Oryza sativa L.) genotypes resistant to blast disease
    Latif, M. A.
    Rahman, M. M.
    Kabir, M. S.
    Ali, M. A.
    Islam, M. T.
    Rafii, M. Y.
    AFRICAN JOURNAL OF MICROBIOLOGY RESEARCH, 2011, 5 (25): : 4383 - 4391
  • [40] Genetic Variation, Heritability, and Diversity Analysis of Upland Rice (Oryza sativa L.) Genotypes Based on Quantitative Traits
    Tuhina-Khatun, Mst.
    Hanafi, Mohamed M.
    Yusop, Mohd Rafii
    Wong, M. Y.
    Salleh, Faezah M.
    Ferdous, Jannatul
    BIOMED RESEARCH INTERNATIONAL, 2015, 2015