Mitochondrial genome of an Atlantic white shark (Carcharodon carcharias)

被引:3
|
作者
Marra, Nicholas J. [1 ,2 ,3 ]
Wang, Minghui [4 ]
Sun, Qi [4 ]
Bitar, Paulina D. Pavinski [1 ]
Stanhope, Michael J. [1 ]
Shivji, Mahmood S. [2 ,3 ]
机构
[1] Cornell Univ, Coll Vet Med, Dept Populat Med & Diagnost Sci, Ithaca, NY 14853 USA
[2] Nova Southeastern Univ, Save Our Seas Shark Res Ctr, 8000 North Ocean Dr, Dania, FL 33004 USA
[3] Nova Southeastern Univ, Guy Harvey Res Inst, 8000 North Ocean Dr, Dania, FL 33004 USA
[4] Cornell Univ, Biotechnol Resource Ctr, Computat Biol Serv Unit, Ithaca, NY USA
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期
关键词
Mitochondrial genome; MITObim; Carcharodon carcharias; ALIGNMENT;
D O I
10.1080/23802359.2016.1222248
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Here we report the first full mitochondrial genome sequence for a white shark caught in the Atlantic Ocean. The mitochondrial genome is 16,745 bp in length and contains 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and a non-coding control region. The base composition of this mtDNA lineage is A: 30.7%, C: 26.9%, G: 13.8%, and T: 28.6%. In concordance with previous population genetic studies, the Atlantic caught individual forms a separate lineage from individuals caught on either side of the Pacific Ocean.
引用
收藏
页码:717 / 719
页数:3
相关论文
共 50 条
  • [21] RECORDS OF THE WHITE SHARK CARCHARODON-CARCHARIAS FROM HOKKAIDO, JAPAN
    NAKANO, H
    NAKAYA, K
    JAPANESE JOURNAL OF ICHTHYOLOGY, 1987, 33 (04): : 414 - 416
  • [22] ATTACKS BY WHITE SHARK, CARCHARODON-CARCHARIAS (LINNAEUS), IN NORTHERN CALIFORNIA
    FOLLETT, WI
    CALIFORNIA FISH AND GAME, 1974, 60 (04): : 192 - 198
  • [23] The occurrence of the white shark, Carcharodon carcharias, at the Point Reyes Headlands, California
    Kelly, JT
    Klimley, AP
    CALIFORNIA FISH AND GAME, 2003, 89 (04): : 187 - 196
  • [24] Distribution, ecology, and status of the white shark, Carcharodon carcharias, in the Mediterranean Sea
    G. Boldrocchi
    J. Kiszka
    S. Purkis
    T. Storai
    L. Zinzula
    D. Burkholder
    Reviews in Fish Biology and Fisheries, 2017, 27 : 515 - 534
  • [25] A first estimate of white shark, Carcharodon carcharias, abundance off Central California
    Chapple, Taylor K.
    Jorgensen, Salvador J.
    Anderson, Scot D.
    Kanive, Paul E.
    Klimley, A. Peter
    Botsford, Louis W.
    Block, Barbara A.
    BIOLOGY LETTERS, 2011, 7 (04) : 581 - 583
  • [26] Per/Polyfluoroalkyl Substances (PFASs) in a Marine Apex Predator (White Shark, Carcharodon carcharias) in the Northwest Atlantic Ocean
    Marciano, Jennifer
    Crawford, Lisa
    Mukhopadhyay, Leenia
    Scott, Wesley
    Mcelroy, Anne
    Mcdonough, Carrie
    ACS ENVIRONMENTAL AU, 2024, 4 (03): : 152 - 161
  • [27] Implications of life history uncertainty when evaluating status in the Northwest Atlantic population of white shark (Carcharodon carcharias)
    Bowlby, Heather D.
    Gibson, A. Jamie F.
    ECOLOGY AND EVOLUTION, 2020, 10 (11): : 4990 - 5000
  • [28] Southernmost record of the white shark Carcharodon carcharias (Chondrichthyes: Lamnidae) in the Mexican Pacific
    Eduardo Becerril-Garcia, Edgar
    Mauricio Hoyos-Padilla, Edgar
    Petatan-Ramirez, David
    Galvan-Magana, Felipe
    LATIN AMERICAN JOURNAL OF AQUATIC RESEARCH, 2019, 47 (01): : 190 - 193
  • [29] Nuclear genetic structure of the white shark (Carcharodon carcharias) from the Northeastern Pacific
    Saavedra-Sotelo, Nancy C.
    Mendivil-Castro, Paul
    Onate-Gonzalez, Erick C.
    LATIN AMERICAN JOURNAL OF AQUATIC RESEARCH, 2023, 51 (03): : 388 - 403
  • [30] RECENT RECORDS OF THE GREAT WHITE SHARK, CARCHARODON-CARCHARIAS, ON THE WASHINGTON COAST
    LEMIER, EH
    COPEIA, 1951, (03) : 249 - 249