Mitochondrial genome of an Atlantic white shark (Carcharodon carcharias)

被引:3
|
作者
Marra, Nicholas J. [1 ,2 ,3 ]
Wang, Minghui [4 ]
Sun, Qi [4 ]
Bitar, Paulina D. Pavinski [1 ]
Stanhope, Michael J. [1 ]
Shivji, Mahmood S. [2 ,3 ]
机构
[1] Cornell Univ, Coll Vet Med, Dept Populat Med & Diagnost Sci, Ithaca, NY 14853 USA
[2] Nova Southeastern Univ, Save Our Seas Shark Res Ctr, 8000 North Ocean Dr, Dania, FL 33004 USA
[3] Nova Southeastern Univ, Guy Harvey Res Inst, 8000 North Ocean Dr, Dania, FL 33004 USA
[4] Cornell Univ, Biotechnol Resource Ctr, Computat Biol Serv Unit, Ithaca, NY USA
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期
关键词
Mitochondrial genome; MITObim; Carcharodon carcharias; ALIGNMENT;
D O I
10.1080/23802359.2016.1222248
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Here we report the first full mitochondrial genome sequence for a white shark caught in the Atlantic Ocean. The mitochondrial genome is 16,745 bp in length and contains 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and a non-coding control region. The base composition of this mtDNA lineage is A: 30.7%, C: 26.9%, G: 13.8%, and T: 28.6%. In concordance with previous population genetic studies, the Atlantic caught individual forms a separate lineage from individuals caught on either side of the Pacific Ocean.
引用
收藏
页码:717 / 719
页数:3
相关论文
共 50 条
  • [1] The complete mitochondrial genome of the great white shark, Carcharodon carcharias (Chondrichthyes, Lamnidae)
    Chang, Chia-Hao
    Shao, Kwang-Tsao
    Lin, Yeong-Shin
    Fang, Yi-Chiao
    Ho, Hsuan-Ching
    MITOCHONDRIAL DNA, 2014, 25 (05): : 357 - 358
  • [2] Movements of the white shark Carcharodon carcharias in the North Atlantic Ocean
    Skomal, G. B.
    Braun, C. D.
    Chisholm, J. H.
    Thorrold, S. R.
    MARINE ECOLOGY PROGRESS SERIES, 2017, 580 : 1 - 16
  • [3] Age and growth of the white shark, Carcharodon carcharias, in the western North Atlantic Ocean
    Natanson, Lisa J.
    Skomal, Gregory B.
    MARINE AND FRESHWATER RESEARCH, 2015, 66 (05) : 387 - 398
  • [4] Length at life stages of the white shark Carcharodon carcharias in the western North Atlantic
    Marquez-Farias, J. Fernando
    Tyminski, John P.
    Fischer, George C.
    Hueter, Robert E.
    ENDANGERED SPECIES RESEARCH, 2024, 53 : 199 - 211
  • [5] NOTES ON THE GREAT WHITE SHARK, CARCHARODON-CARCHARIAS, IN CANADIAN ATLANTIC WATERS
    DAY, LR
    FISHER, HD
    COPEIA, 1954, (04) : 295 - 296
  • [6] The complete mitochondrial DNA of white shark (Carcharodon carcharias) from Isla Guadalupe, Mexico
    Diaz-Jaimes, Pindaro
    Hinojosa-Alvarez, Silvia
    Sanchez-Hernandez, Xochitl
    Hoyos-Padilla, Mauricio
    Garcia-De-Leon, Francisco J.
    MITOCHONDRIAL DNA PART A, 2016, 27 (02) : 1281 - 1282
  • [7] Characterization of the heart transcriptome of the white shark (Carcharodon carcharias)
    Richards, Vincent P.
    Suzuki, Haruo
    Stanhope, Michael J.
    Shivji, Mahmood S.
    BMC GENOMICS, 2013, 14
  • [8] Regulation of body temperature in the white shark, Carcharodon carcharias
    Kenneth J. Goldman
    Journal of Comparative Physiology B, 1997, 167 : 423 - 429
  • [9] TEMPERATURE AND ACTIVITIES OF A WHITE SHARK, CARCHARODON-CARCHARIAS
    CAREY, FG
    KANWISHER, JW
    BRAZIER, O
    GABRIELSON, G
    CASEY, JG
    PRATT, HL
    COPEIA, 1982, (02) : 254 - 260
  • [10] A global review of white shark (Carcharodon carcharias) parturition
    O'Connell, Craig P.
    Dodd, Jon F.
    Crews, Julia
    Gressle, Juliet
    Racicot, Breanna
    Sitzer, Steven
    Lis, Timothy
    Skomal, Gregory B.
    REVIEWS IN FISH BIOLOGY AND FISHERIES, 2024, 34 (03) : 869 - 893