Scales and multimodal flux distributions in stationary metabolic network models via thermodynamics

被引:2
|
作者
De Martino, Daniele [1 ]
机构
[1] IST Austria, Campus 1, A-3400 Klosterneuburg, Austria
关键词
BALANCE; CRITICALITY;
D O I
10.1103/PhysRevE.95.062419
中图分类号
O35 [流体力学]; O53 [等离子体物理学];
学科分类号
070204 ; 080103 ; 080704 ;
摘要
In this work it is shown that scale-free tails in metabolic flux distributions inferred in stationary models are an artifact due to reactions involved in thermodynamically unfeasible cycles, unbounded by physical constraints and in principle able to perform work without expenditure of free energy. After implementing thermodynamic constraints by removing such loops, metabolic flux distributions scale meaningfully with the physical limiting factors, acquiring in turn a richer multimodal structure potentially leading to symmetry breaking while optimizing for objective functions.
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页数:5
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