Methylome profiling identifies TCHH methylation in CfDNA as a noninvasive marker of liver metastasis in colorectal cancer

被引:4
|
作者
Chen, Shanwen [1 ]
Liu, Tao [1 ]
Bu, Dingfang [2 ]
Zhu, Jing [1 ]
Wang, Xin [1 ]
Pan, Yisheng [1 ]
Liu, Yucun [1 ]
Lu, Zhi John [3 ]
Wang, Pengyuan [1 ]
机构
[1] Peking Univ First Hosp, Div Gen Surg, Beijing, Peoples R China
[2] Peking Univ First Hosp, Cent Lab, Beijing, Peoples R China
[3] Tsinghua Univ, Ctr Synthet & Syst Biol, Sch Life Sci, MOE Key Lab Bioinformat, Beijing, Peoples R China
来源
FASEB JOURNAL | 2021年 / 35卷 / 07期
基金
中国国家自然科学基金;
关键词
CfDNA; colorectal cancer; liver metastasis; methylight; methylome; TCHH; DNA; PLASMA;
D O I
10.1096/fj.202100266R
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Methylation of circulating free DNA (CfDNA) has emerged as an efficient marker of tumor screening and prognostics. However, no efficient methylation marker has been developed for monitoring liver metastasis (LM) in colorectal cancer (CRC). Utilizing methylome profiling and bisulfite sequencing polymerase chain reaction of paired primary and LM sites, significantly increased methylation of TCHH was identified in the process of LM in CRC in the present study. Methylight analysis of TCHH methylation in CfDNA displayed a promisingly discriminative power between CRC with and without LM. Besides, significant coefficient of TCHH methylation and LM tumor volume was also validated. Together, these results indicated the potential of TCHH methylation in CfDNA as a monitoring marker of LM in CRC.
引用
收藏
页数:11
相关论文
共 50 条
  • [41] Growth pattern of colorectal liver metastasis as a marker of recurrence risk
    Eefsen, R. L.
    Vermeulen, P. B.
    Christensen, I. J.
    Laerum, O. D.
    Mogensen, M. B.
    Rolff, H. C.
    Van den Eynden, G. G.
    Hoyer-Hansen, G.
    Osterlind, K.
    Vainer, B.
    Illemann, M.
    CLINICAL & EXPERIMENTAL METASTASIS, 2015, 32 (04) : 369 - 381
  • [42] Differential microRNA expression profiling in primary tumors and matched liver metastasis of patients with colorectal cancer
    Li, Wenhua
    Chang, Jinjia
    Tong, Duo
    Peng, Junjie
    Huang, Dan
    Guo, Weijian
    Zhang, Wen
    Li, Jin
    ONCOTARGET, 2017, 8 (22) : 35783 - 35791
  • [43] Matrix metalloproteinase-2 and-9 in bile as a marker of liver metastasis in colorectal cancer
    Okada, N
    Ishida, H
    Murata, N
    Hashimoto, D
    Seyama, Y
    Kubota, S
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2001, 288 (01) : 212 - 216
  • [44] Genomic profiling of colorectal cancer with isolated lung metastasis
    Zhang, Nan
    Di, Jiabo
    Wang, Zaozao
    Gao, Pin
    Jiang, Beihai
    Su, Xiangqian
    CANCER CELL INTERNATIONAL, 2020, 20 (01)
  • [45] Genomic profiling of colorectal cancer with isolated lung metastasis
    Nan Zhang
    Jiabo Di
    Zaozao Wang
    Pin Gao
    Beihai Jiang
    Xiangqian Su
    Cancer Cell International, 20
  • [46] Impact of lymph node metastasis on immune microenvironment and prognosis in colorectal cancer liver metastasis: insights from multiomics profiling
    Zhang, Yueyang
    Wu, Deng
    Zhang, Zhen
    Ma, Jian
    Jiao, Shuai
    Ma, Xiaolong
    Li, Jiangtao
    Meng, Yongsheng
    Zhao, Zhixun
    Chen, Haipeng
    Jiang, Zheng
    Wang, Guiyu
    Liu, Haiyi
    Xi, Yanfeng
    Zhou, Haitao
    Wang, Xishan
    Guan, Xu
    BRITISH JOURNAL OF CANCER, 2025, 132 (06) : 513 - 524
  • [47] Epigenome-wide DNA methylation profiling identifies the TNXB gene as a potential epigenetic candidate for colorectal cancer prevention
    Boughanem, H.
    Ramos, M.
    Pilo, J.
    Garcia-Flores, L.
    Alcaide-Garcia, J.
    Macias Gonzalez, M.
    ANNALS OF ONCOLOGY, 2023, 34 : S31 - S31
  • [48] DNA methylation profiling identifies epigenetic signatures of early gastric cancer
    Zhongyue Shi
    Xinmeng Guo
    Xiumei Hu
    Ruiqi Li
    Xue Li
    Jun Lu
    Mulan Jin
    Xingran Jiang
    Virchows Archiv, 2024, 484 : 687 - 695
  • [49] DNA methylation profiling identifies epigenetic signatures of early gastric cancer
    Shi, Zhongyue
    Guo, Xinmeng
    Hu, Xiumei
    Li, Ruiqi
    Li, Xue
    Lu, Jun
    Jin, Mulan
    Jiang, Xingran
    VIRCHOWS ARCHIV, 2024, 484 (04) : 687 - 695
  • [50] Global methylation profiling of lung cancer identifies novel methylated genes
    Dai, ZY
    Lakshmanan, RR
    Zhu, WG
    Smiraglia, DJ
    Rush, LJ
    Frühwald, MC
    Brena, RM
    Li, B
    Wright, FA
    Ross, P
    Otterson, GA
    Plass, C
    NEOPLASIA, 2001, 3 (04): : 314 - 323