Functional exploration of the glycoside hydrolase family GH113

被引:6
|
作者
Couturier, Marie [1 ]
Touvrey-Loiodice, Melanie [1 ]
Terrapon, Nicolas [2 ]
Drula, Elodie [2 ,3 ]
Buon, Laurine [1 ]
Chirat, Christine [4 ]
Henrissat, Bernard [5 ,6 ]
Helbert, William [1 ]
机构
[1] Univ Grenoble Alpes, CNRS, CERMAV, Grenoble, France
[2] Aix Marseille Univ, AFMB, UMR CNRS 7257, USC INRAE 1408, Marseille, France
[3] INRAE, Biodiversite & Biotechnol Fong, UMR 1163, Marseille, France
[4] Univ Grenoble Alpes, Inst Engn Grenoble INP, CNRS, LGP2, Grenoble, France
[5] King Abdulaziz Univ, Dept Biol Sci, Jeddah, Saudi Arabia
[6] Tech Univ Denmark, DTU Bioengn, Lyngby, Denmark
来源
PLOS ONE | 2022年 / 17卷 / 04期
关键词
CELLULOSIC STRUCTURAL POLYSACCHARIDES; ALGAL CELL-WALLS; CATALYTIC MECHANISM; MANNAN; BETA-1,4-MANNANASE; ALIGNMENT; ACCURATE; DATABASE;
D O I
10.1371/journal.pone.0267509
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
beta-Mannans are a heterogeneous group of polysaccharides with a common main chain of beta-1,4-linked mannopyranoside residues. The cleavage of beta-mannan chains is catalyzed by glycoside hydrolases called beta-mannanases. In the CAZy database, beta-mannanases are grouped by sequence similarity in families GH5, GH26, GH113 and GH134. Family GH113 has been under-explored so far with six enzymes characterized, all from the Firmicutes phylum. We undertook the functional characterization of 14 enzymes from a selection of 31 covering the diversity of the family GH113. Our observations suggest that GH113 is a family with specificity towards mannans, with variations in the product profiles and modes of action. We were able to assign mannanase and mannosidase activities to four out of the five clades of the family, increasing by 200% the number of characterized GH113 members, and expanding the toolbox for fine-tuning of mannooligosaccharides.
引用
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页数:14
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