Energy landscapes and solved protein-folding problems

被引:143
|
作者
Wolynes, PG
机构
[1] Univ Calif San Diego, Dept Chem & Biochem, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, Dept Phys, La Jolla, CA 92093 USA
[3] Univ Calif San Diego, Ctr Theoret Biol Phys, La Jolla, CA 92093 USA
关键词
energy landscape theory; protein folding; funnel;
D O I
10.1098/rsta.2004.1502
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Energy-landscape theory has led to much progress in protein folding kinetics, protein structure prediction and protein design. Funnel landscapes describe protein folding and binding and explain how protein topology determines kinetics. Landscape-optimized energy functions based on bioinformatic input have been used to correctly predict low-resolution protein structures and also to design novel proteins automatically.
引用
收藏
页码:453 / 464
页数:12
相关论文
共 50 条
  • [41] PARSER FOR PROTEIN-FOLDING UNITS
    HOLM, L
    SANDER, C
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 1994, 19 (03) : 256 - 268
  • [42] ROLE OF HYDRATION IN PROTEIN-FOLDING
    SCHERAGA, HA
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1993, 206 : 30 - PMSE
  • [43] PROTEIN-FOLDING - PREDICTING PREDICTING
    ROSE, GD
    CREAMER, TP
    PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, 1994, 19 (01) : 1 - 3
  • [44] PROTEIN-FOLDING - CHAPERONIN DUET
    ELLIS, RJ
    NATURE, 1993, 366 (6452) : 213 - 214
  • [45] TOY MODEL FOR PROTEIN-FOLDING
    STILLINGER, FH
    HEADGORDON, T
    HIRSHFELD, CL
    PHYSICAL REVIEW E, 1993, 48 (02): : 1469 - 1477
  • [46] FAST EVENTS IN PROTEIN-FOLDING
    CHAN, CK
    EATON, WA
    HAGEN, SJ
    HENRY, ER
    HOFRICHTER, J
    HU, Y
    THOMPSON, PA
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1995, 210 : 26 - PHYS
  • [47] THE CHAPERONIN CYCLE AND PROTEIN-FOLDING
    LUND, P
    BIOESSAYS, 1994, 16 (04) : 229 - 231
  • [48] PATHWAY AND STABILITY OF PROTEIN-FOLDING
    FERSHT, AR
    BIOCHEMICAL SOCIETY TRANSACTIONS, 1994, 22 (02) : 267 - 273
  • [49] A localized protein-folding problem
    Chen, SS
    INTERNATIONAL JOURNAL OF INTELLIGENT SYSTEMS, 2001, 16 (04) : 449 - 457
  • [50] COOPERATIVITY IN PROTEIN-FOLDING KINETICS
    DILL, KA
    FIEBIG, KM
    CHAN, HS
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (05) : 1942 - 1946