Hybridization of DNA at the surface of phospholipid monolayers. Effect of orientation of oligonucleotide chains

被引:12
|
作者
Hianik, T
Vitovic, P
Humenik, D
Andreev, SY
Oretskaya, TS
Hall, EAH
Vadgama, P
机构
[1] Comenius Univ, Fac Math & Phys, Dept Biophys & Chem Phys, Bratislava 84248, Slovakia
[2] Moscow MV Lomonosov State Univ, Dept Chem, Moscow 119899, Russia
[3] Univ Cambridge, Inst Biotechnol, Cambridge CB2 1QT, England
[4] Univ London, Univ London Queen Mary & Westfield Coll, IRC Biomed Mat, London E1 4NS, England
关键词
DNA; oligonucleotide orientation; hybridization; Langmuir-Blodgett technique; DOPC monolayers;
D O I
10.1016/S1567-5394(02)00187-1
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We studied the properties of lipid monolayers formed at the air-water interface composed of dioleoylphosphatidylcholine (DOPC) with incorporated short (19-mer) oligonucleotides. These oligonucleotides were modified by oleylamine at both (3' and 5') terminals or only at one (3') terminal. Interaction of single-stranded (19-mer) oligonucleotides without oleylamine with DOPC monolayers resulted only in slight increase of surface pressure and the area per phospholipid molecule, while more substantial and significant increase of these values were observed following incorporation of oligonucelotides modified by oleylamine. This influence is similar for both types of oligonucleotide modifications. However, considerable differences in changes of monolayer properties took place after hybridization with complementary oligonucleotides. The hybridization of oligonucleotides with the DNA modified by oleic acid at both 3' and 5' terminals at the surface of lipid monolayer resulted in further increase of surface pressure and in the increase of the area per phospholipid molecule, while decrease of both the surface pressure and the area per phospholipid molecules were observed for hybridization with DNA modified by oleic acid at 3' terminal. It is possible that in latter case, the hybridization caused the loss of hybridized molecules from monolayers. Interaction of noncomplementary chains with DOPC monolayers with incorporated oleyl acid-modified DNA also influenced the properties of monolayers, but the effect was weaker in comparison with that observed for complementary chains. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:35 / 40
页数:6
相关论文
共 50 条
  • [41] Quantitative Study of the Effect of Coverage on the Hybridization Efficiency of Surface-Bound DNA Nanostructures
    Mirmomtaz, Elham
    Castronovo, Matteo
    Grunwald, Christian
    Bano, Fouzia
    Scaini, Denis
    Ensafi, Ali A.
    Scoles, Giacinto
    Casalis, Loredana
    NANO LETTERS, 2008, 8 (12) : 4134 - 4139
  • [42] Effect of surface pretreatment on self-assembly of thiol-modified DNA monolayers on gold electrode
    Li, Zhiguo
    Zhang, Lingling
    Zeng, Shili
    Zhang, Menghua
    Du, Ermei
    Li, Baole
    JOURNAL OF ELECTROANALYTICAL CHEMISTRY, 2014, 722 : 131 - 140
  • [43] The effect of the shape of single, sub-ms voltage pulses on the rates of surface immobilization and hybridization of DNA
    Cabeca, R.
    Rodrigues, M.
    Prazeres, D. M. F.
    Chu, V.
    Conde, J. P.
    NANOTECHNOLOGY, 2009, 20 (01)
  • [44] Surface effect control: Improve the hybridization efficiency of the immobilized molecular beacon and other DNA probes on nanoparticles.
    Li, JWJ
    Tan, WH
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2002, 223 : U458 - U458
  • [45] Influence of the non-ionic surfactant PEG-660-12-hydroxy stearate on the surface properties of phospholipid monolayers and their effect on lipid emulsion stability
    M. Jumaa
    B. W. Müller
    Colloid and Polymer Science, 1999, 277 : 347 - 353
  • [46] Influence of the non-ionic surfactant PEG-660-12-hydroxy stearate on the surface properties of phospholipid monolayers and their effect on lipid emulsion stability
    Jumaa, M
    Müller, BW
    COLLOID AND POLYMER SCIENCE, 1999, 277 (04) : 347 - 353
  • [47] Oligodeoxyribonucleotide probe accessibility on a three-dimensional DNA microarray surface and the effect of hybridization time on the accuracy of expression ratios
    Dorris, DR
    Nguyen, A
    Gieser, L
    Lockner, R
    Lublinsky, A
    Patterson, M
    Touma, E
    Sendera, TJ
    Elghanian, R
    Mazumder, A
    BMC BIOTECHNOLOGY, 2003, 3 (1)
  • [48] Oligodeoxyribonucleotide probe accessibility on a three-dimensional DNA microarray surface and the effect of hybridization time on the accuracy of expression ratios
    David R Dorris
    Allen Nguyen
    Linn Gieser
    Randall Lockner
    Anna Lublinsky
    Marcus Patterson
    Edward Touma
    Timothy J Sendera
    Robert Elghanian
    Abhijit Mazumder
    BMC Biotechnology, 3
  • [49] Shielding effect of monovalent and divalent cations on solid-phase DNA hybridization: surface plasmon resonance biosensor study
    Springer, Tomas
    Sipova, Hana
    Vaisocherova, Hana
    Stepanek, Josef
    Homola, Jiri
    NUCLEIC ACIDS RESEARCH, 2010, 38 (20) : 7343 - 7351
  • [50] Immobilization of DNA probes onto gold surface and its application to fully electric detection of DNA hybridization using field-effect transistor sensor
    Ishige, Yu
    Shimoda, Maki
    Kamahori, Masao
    JAPANESE JOURNAL OF APPLIED PHYSICS PART 1-REGULAR PAPERS BRIEF COMMUNICATIONS & REVIEW PAPERS, 2006, 45 (4B): : 3776 - 3783