Paternity identification in Spondias tuberosa (Anacardiaceae: Sapindales) polycrosses using microsatellite loci

被引:0
|
作者
Santos, V. N. [1 ]
Costa, A. E. S. [2 ]
Santos, C. A. F. [3 ]
机构
[1] Univ Estadual Feira de Santana, Programa Recursos Genet Vegetais, Feira De Santana, BA, Brazil
[2] Univ Fed Rural Pernambuco, Programa Melhoramento Genet Plantas, Recife, PE, Brazil
[3] Empresa Brasileira Pesquisa Agr, Embrapa Semiarido, Petrolina, PE, Brazil
来源
GENETICS AND MOLECULAR RESEARCH | 2021年 / 20卷 / 02期
关键词
Umbu tree; Hybrids; SSR; Plant breeding; GENETIC-VARIABILITY; REGION;
D O I
10.4238/gmr18816
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The umbu tree (Spondias tuberosa) is endemic to the Brazilian semiarid region. This species is not cultivated and commercialized fruits are a result of extrativism; consequently little has been done to develop new and more productive cultivars. Hybrids of different accessions are a result of natural open pollination, so identifying putative male parents among progenies of umbu tree accessions is difficult. Eight accessions were pre-selected for larger fruit size and clones were established at Petrolina, PE. Female plants were randomly chosen among accessions of an established umbu tree experimental plot. Alleles of putative male parents were evaluated based on simple sequence repeat (SSR) loci. Of the 32 SSR loci evaluated, 10 showed polymorphism. Thirty-four alleles were identified, with an average of 3.4/locus. Polymorphism information content ranged from 0.195 to 0.744; the expected ranged from 0.233 to 0.825 and the observed heterozygosity ranged from 0.250 to 0.825. Accessions similarity ranged from 0.44 to 0.68, distributed into two groups: (I) common umbu, BGU30, BGU37, BGU44, BGU55 and BGU68, and (II) BGU 48 and BGU52. Hybrids and self-fertilized plants were identified among BGU30 and BGU37 progenies; 17 out of 20 and 14 out of 44 hybrids were identified by SSR loci in the BGU30 and BGU37 progenies, respectively. The putative hybrids BGU30 x BGU48, BGU30 x BGU55, BGU30 x BGU44, BGU30 x BGU68, BGU37 x BGU44, BGU37 x BGU55 and BGU37 x BGU52 have potential for future evaluations, as they were more divergent in the dendrogram or had male parents with higher weight fruits. The 10 SSR loci were sufficient to identify a single parent in 12 of 20 BGU30 hybrids and all 14 BGU37 hybrids, demonstrating the potential of this procedure.
引用
收藏
页数:10
相关论文
共 22 条
  • [21] Identification and characterisation of ten microsatellite loci in the Noisy Scrub-bird Atrichornis clamosus using next-generation sequencing technology
    S. J. Cowen
    R. J. N. Allcock
    S. J. Comer
    J. D. Wetherall
    D. M. Groth
    Conservation Genetics Resources, 2013, 5 : 623 - 625
  • [22] Identification of 18 polymorphic microsatellite loci in the spruce bark beetle Ips typographus (Coleoptera: Scolytidae) using high-throughput sequence data
    Stoeckle, Bernhard C.
    Kuehn, Ralph
    EUROPEAN JOURNAL OF ENTOMOLOGY, 2011, 108 (01) : 169 - 171