Substrate specificity of Escherichia coli thymidine phosphorylase

被引:19
|
作者
Panova, N. G.
Alexeev, C. S.
Kuzmichov, A. S.
Shcheveleva, E. V.
Gavryushov, S. A.
Polyakov, K. M.
Kritzyn, A. M.
Mikhailov, S. N.
Esipov, R. S.
Miroshnikov, A. I.
机构
[1] Russian Acad Sci, Engelhardt Inst Mol Biol, Moscow 119991, Russia
[2] Russian Acad Sci, Shemyakin & Ovchinnikov Inst Bioorgan Chem, Moscow 117997, Russia
基金
俄罗斯基础研究基金会;
关键词
thymidine phosphorylase; thymidine derivatives; substrate specificity; inhibitors; analysis in terms of steric interactions;
D O I
10.1134/S0006297907010026
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Substrate specificity of Escherichia coli thymidine phosphorylase to thymidine derivatives modified at 5'-, 3'-, and 2',3'-positions of the sugar moiety was studied. Equilibrium and kinetic constants (K (m), K (I), k (cat)) of the phosphorolysis reaction have been determined for 20 thymidine analogs. The results are compared with X-ray and molecular dynamics data. The most important hydrogen bonds in the enzyme-substrate complex are revealed.
引用
收藏
页码:21 / 28
页数:8
相关论文
共 50 条
  • [31] SUBSTRATE SPECIFICITY OF MALTOSE PHOSPHORYLASE
    MORGAN, K
    WHELAN, WJ
    NATURE, 1962, 196 (4850) : 168 - &
  • [32] Identification of a novel class of inhibitor of human and Escherichia coli thymidine phosphorylase by in silico screening
    McNally, VA
    Gbaj, A
    Douglas, KT
    Stratford, IJ
    Jaffar, M
    Freeman, S
    Bryce, RA
    BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2003, 13 (21) : 3705 - 3709
  • [33] Design, synthesis, and enzymatic evaluation of multisubstrate analogue inhibitors of Escherichia coli thymidine phosphorylase
    Esteban-Gamboa, A
    Balzarini, J
    Esnouf, R
    De Clercq, E
    Camarasa, MJ
    Pérez-Pérez, MJ
    JOURNAL OF MEDICINAL CHEMISTRY, 2000, 43 (05) : 971 - 983
  • [34] Importance of 3′-hydroxyl group of the nucleosides for the reactivity of thymidine phosphorylase from Escherichia coli
    Hatano, A
    Harano, A
    Kirihara, M
    CHEMISTRY LETTERS, 2006, 35 (02) : 232 - 233
  • [35] PURIFICATION OF THYMIDINE PHOSPHORYLASE FROM ESCHERICHIA-COLI AND ITS PHOTOINACTIVATION IN PRESENCE OF THYMINE, THYMIDINE, AND SOME HALOGENATED ANALOGS
    VOYTEK, P
    JOURNAL OF BIOLOGICAL CHEMISTRY, 1975, 250 (10) : 3660 - 3665
  • [36] Substrate specificity of the Escherichia coli outer membrane protease OmpP
    Hwang, Bum-Yeol
    Varadarajan, Navin
    Li, Haixin
    Rodriguez, Sarah
    Iverson, Brent L.
    Georgiou, George
    JOURNAL OF BACTERIOLOGY, 2007, 189 (02) : 522 - 530
  • [37] SUBSTRATE-SPECIFICITY OF ESCHERICHIA-COLI GLUTAMATE DECARBOXYLASE
    SUKHAREVA, BS
    MALIKOVA, LG
    MOLECULAR BIOLOGY, 1977, 11 (02) : 302 - 307
  • [38] SUBSTRATE SPECIFICITY OF ESCHERICHIA-COLI PEPTIDYL-TRANSFERASE
    PANET, A
    DEGROOT, N
    LAPIDOT, Y
    EUROPEAN JOURNAL OF BIOCHEMISTRY, 1970, 15 (02): : 222 - &
  • [39] Substrate specificity for 4-thiouridine modification in Escherichia coli
    Lauhon, CT
    Erwin, WM
    Ton, GN
    JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (22) : 23022 - 23029
  • [40] Substrate specificity and catalytic mechanism of the Escherichia coli FrlB amadoriase
    Atanasova, A.
    Mittelmaier, S.
    Handzhiyski, Y.
    Sredovska, A.
    Ivanov, I.
    Ivanov, R.
    FEBS JOURNAL, 2010, 277 : 269 - 269