Substrate channeling between the human dihydrofolate reductase and thymidylate synthase

被引:19
|
作者
Wang, Nuo [1 ]
McCammon, J. Andrew [1 ,2 ,3 ]
机构
[1] Univ Calif San Diego, Dept Chem & Biochem, La Jolla, CA 92037 USA
[2] Univ Calif San Diego, Dept Pharmacol, La Jolla, CA 92037 USA
[3] Univ Calif San Diego, Howard Hughes Med Inst, La Jolla, CA 92037 USA
基金
美国国家卫生研究院; 美国国家科学基金会;
关键词
metabolon; substrate channeling; electrostatic channeling; dihydrofolate reductase; thymidylate synthase; bifunctional DHFR-TS; folate; one-carbon metabolism; SITE-DIRECTED MUTAGENESIS; BROWNIAN DYNAMICS; PROTEIN DOCKING; MALATE-DEHYDROGENASE; MOLECULAR-DYNAMICS; CITRATE SYNTHASE; FUSION PROTEIN; DRUG TARGET; SIMULATIONS; LEISHMANIA;
D O I
10.1002/pro.2720
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In vivo, as an advanced catalytic strategy, transient non-covalently bound multi-enzyme complexes can be formed to facilitate the relay of substrates, i.e. substrate channeling, between sequential enzymatic reactions and to enhance the throughput of multi-step enzymatic pathways. The human thymidylate synthase and dihydrofolate reductase catalyze two consecutive reactions in the folate metabolism pathway, and experiments have shown that they are very likely to bind in the same multi-enzyme complex in vivo. While reports on the protozoa thymidylate synthase-dihydrofolate reductase bifunctional enzyme give substantial evidences of substrate channeling along a surface "electrostatic highway," attention has not been paid to whether the human thymidylate synthase and dihydrofolate reductase, if they are in contact with each other in the multienzyme complex, are capable of substrate channeling employing surface electrostatics. This work utilizes protein-protein docking, electrostatics calculations, and Brownian dynamics to explore the existence and mechanism of the substrate channeling between the human thymidylate synthase and dihydrofolate reductase. The results show that the bound human thymidylate synthase and dihydrofolate reductase are capable of substrate channeling and the formation of the surface "electrostatic highway." The substrate channeling efficiency between the two can be reasonably high and comparable to that of the protozoa.
引用
收藏
页码:79 / 86
页数:8
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