A Forensic Detection Method for Hallucinogenic Mushrooms via High-Resolution Melting (HRM) Analysis

被引:5
|
作者
Zhang, Xiaochun [1 ,2 ]
Yu, Huan [1 ,2 ]
Yang, Qi [1 ,2 ]
Wang, Ziwei [1 ,2 ]
Xia, Ruocheng [2 ,3 ]
Chen, Chong [2 ,4 ]
Qu, Yiling [1 ,2 ]
Tan, Rui [1 ,2 ]
Shi, Yan [2 ]
Xiang, Ping [2 ]
Zhang, Suhua [2 ]
Li, Chengtao [1 ,2 ]
机构
[1] Soochow Univ, Sch Med, Dept Forens Sci, Suzhou 215123, Peoples R China
[2] Minist Justice, Acad Forens Sci, Shanghai Forens Serv Platform, Shanghai Key Lab Forens Med, Shanghai 200063, Peoples R China
[3] Wenzhou Med Univ, Sch Basic Med Sci, Dept Forens Med, Wenzhou 325035, Peoples R China
[4] Xi An Jiao Tong Univ, Coll Med & Forens, Hlth Sci Ctr, Xian 710061, Peoples R China
关键词
polymerase chain reaction (PCR); high-resolution melting (HRM); DNA barcoding; internal transcribed spacer (ITS); Psilocybe cubensis;
D O I
10.3390/genes12020199
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
In recent years, trafficking and abuse of hallucinogenic mushrooms have become a serious social problem. It is therefore imperative to identify hallucinogenic mushrooms of the genus Psilocybe for national drug control legislation. An internal transcribed spacer (ITS) is a DNA barcoding tool utilized for species identification. Many methods have been used to discriminate the ITS region, but they are often limited by having a low resolution. In this study, we sought to analyze the ITS and its fragments, ITS1 and ITS2, by using high-resolution melting (HRM) analysis, which is a rapid and sensitive method for evaluating sequence variation within PCR amplicons. The ITS HRM assay was tested for specificity, reproducibility, sensitivity, and the capacity to analyze mixture samples. It was shown that the melting temperatures of the ITS, ITS1, and ITS2 of Psilocybe cubensis were 83.72 +/- 0.01, 80.98 +/- 0.06, and 83.46 +/- 0.08 degrees C, and for other species, we also obtained species-specific results. Finally, we performed ITS sequencing to validate the presumptive taxonomic identity of our samples, and the sequencing output significantly supported our HRM data. Taken together, these results indicate that the HRM method can quickly distinguish the DNA barcoding of Psilocybe cubensis and other fungi, which can be utilized for drug trafficking cases and forensic science.
引用
下载
收藏
页码:1 / 14
页数:14
相关论文
共 50 条
  • [31] A Statistical Method to Enhance the Analysis of the Differences Among High-Resolution Melting (HRM) Curves of PCR-Amplified DNA Fragments
    Ibarrondo, Oliver
    Lopez-Oceja, Andres
    Baeta, Miriam
    de Pancorbo, Marian M.
    JOURNAL OF FOOD SCIENCE, 2019, 84 (10) : 2719 - 2728
  • [32] Applying high-resolution melting (HRM) technology to olive oil and wine authenticity
    Pereira, Leonor
    Gomes, Sonia
    Barrias, Sara
    Fernandes, Jose Ramiro
    Martins-Lopes, Paula
    FOOD RESEARCH INTERNATIONAL, 2018, 103 : 170 - 181
  • [33] A Multiplex High-Resolution Melting (HRM) assay to differentiate Fusarium graminearum chemotypes
    Lovepreet Singh
    Milton T. Drott
    Hye-Seon Kim
    Robert H. Proctor
    Susan P. McCormick
    J. Mitch Elmore
    Scientific Reports, 14 (1)
  • [34] Rapid Detection and Identification of Human Hookworm Infections through High Resolution Melting (HRM) Analysis
    Ngui, Romano
    Lim, Yvonne A. L.
    Chua, Kek Heng
    PLOS ONE, 2012, 7 (07):
  • [35] Automated high-throughput extraction system of sRNA and high-resolution melting quantitative PCR (HRM-qPCR) analysis for viroid detection
    Kanavedee, Raimathy
    Mahamooth, Tasren Nazir
    HELIYON, 2023, 9 (12)
  • [36] Detection and quantification of cashew in commercial tea products using High Resolution Melting (HRM) analysis
    Lagiotis, Georgios
    Stavridou, Evangelia
    Bosmali, Irini
    Osathanunkul, Maslin
    Haider, Nadia
    Madesis, Panagiotis
    JOURNAL OF FOOD SCIENCE, 2020, 85 (06) : 1629 - 1634
  • [37] High-resolution melting (HRM) for genotyping bovine ephemeral fever virus (BEFV)
    Erster, Oran
    Stram, Rotem
    Menasherow, Shopia
    Rubistein-Giuni, Marisol
    Sharir, Binyamin
    Kchinich, Evgeni
    Stram, Yehuda
    VIRUS RESEARCH, 2017, 229 : 1 - 8
  • [38] Barcode DNA high-resolution melting (Bar-HRM) analysis as a novel close-tubed and accurate tool for olive oil forensic use
    Ganopoulos, Ioannis
    Bazakos, Christos
    Madesis, Panagiotis
    Kalaitzis, Panagiotis
    Tsaftaris, Athanasios
    JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE, 2013, 93 (09) : 2281 - 2286
  • [39] Multi-locus identification of Psilocybe cubensis by high-resolution melting (HRM)
    Zhang, Xiaochun
    Yu, Huan
    Wang, Ziwei
    Yang, Qi
    Xia, Ruocheng
    Qu, Yiling
    Tao, Ruiyang
    Shi, Yan
    Xiang, Ping
    Zhang, Suhua
    Li, Chengtao
    FORENSIC SCIENCES RESEARCH, 2022, 7 (03) : 490 - 497
  • [40] Identification case of evidence in timber tracing of Pinus radiate, using high-resolution melting (HRM) analysis
    Solano, Jaime
    Anabalon, Leonardo
    Encina, Francisco
    FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2016, 21 : E6 - E9