First-principles-based reaction kinetics from reactive molecular dynamics simulations: Application to hydrogen peroxide decomposition

被引:32
|
作者
Ilyin, Daniil V. [1 ]
Goddard, William A., III [1 ]
Oppenheim, Julius J. [1 ]
Cheng, Tao [1 ]
机构
[1] CALTECH, Mat & Proc Simulat Ctr, Pasadena, CA 91125 USA
基金
美国国家科学基金会;
关键词
reaction kinetics; ReaxFF reactive force field; reactive molecular dynamics; RMD2Kin; ReaxMD2Kin; FREE-ENERGY CALCULATIONS; FORCE-FIELD; ELECTROCHEMICAL REDUCTION; REAXFF; MECHANISM; CO; OPTIMIZATION; VALIDATION; CHEMISTRY; OXIDATION;
D O I
10.1073/pnas.1701383115
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
This paper presents our vision of how to use in silico approaches to extract the reaction mechanisms and kinetic parameters for complex condensed-phase chemical processes that underlie important technologies ranging from combustion to chemical vapor deposition. The goal is to provide an analytic description of the detailed evolution of a complex chemical system from reactants through various intermediates to products, so that one could optimize the efficiency of the reactive processes to produce the desired products and avoid unwanted side products. We could start with quantum mechanics (QM) to ensure an accurate description; however, to obtain useful kinetics we need to average over similar to 10-nm spatial scales for similar to 1 ns, which is prohibitively impractical with QM. Instead, we use the reactive force field (ReaxFF) trained to fit QM to carry out the reactive molecular dynamics (RMD). We focus here on showing that it is practical to extract from such RMD the reaction mechanisms and kinetics information needed to describe the reactions analytically. This analytic description can then be used to incorporate the correct reaction chemistry from the QM/ReaxFF atomistic description into larger-scale simulations of similar to 10 nm to micrometers to millimeters to meters using analytic approaches of computational fluid dynamics and/or continuum chemical dynamics. In the paper we lay out the strategy to extract the mechanisms and rate parameters automatically without the necessity of knowing any details of the chemistry. We consider this to be a proof of concept. We refer to the process as RMD2Kin (reactive molecular dynamics to kinetics) for the general approach and as ReaxMD2Kin (ReaxFF molecular dynamics to kinetics) for QM-ReaxFF-based reaction kinetics.
引用
收藏
页码:18202 / 18208
页数:7
相关论文
共 50 条
  • [31] Insights into uranyl(VI) chemistry from first-principles molecular dynamics simulations
    Buehl, Michael
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2009, 238
  • [32] Protein folding simulations from first principles by a new molecular dynamics method.
    Huang, ZN
    Guo, ZY
    Wheeler, RA
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2005, 229 : U768 - U769
  • [33] Characterization of aqueous actinide complexes from first-principles molecular dynamics simulations
    Lo, Carl
    Vu, Minh
    Massey, Michael
    Huang, Patrick
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2016, 251
  • [34] Insights into the reduction of carbon dioxide in water from first principles molecular dynamics simulations
    Kanai, Yosuke
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2011, 241
  • [35] First-Principles-Based Calculations of Vibrational Normal Modes in Polyatomic Materials with Translational Symmetry: Application to PETN Molecular Crystal
    Velizhanin, Kirill A.
    Kilina, Svetlana
    Sewell, Thomas D.
    Piryatinski, Andrei
    JOURNAL OF PHYSICAL CHEMISTRY B, 2008, 112 (42): : 13252 - 13257
  • [36] First-principles-based machine learning interatomic potential for molecular dynamics simulations of 2D lateral MoS2/WS2 heterostructures
    Liu, Xiangjun
    Wang, Baolong
    Jia, Kun
    Wang, Quanjie
    Wang, Di
    Xiong, Yucheng
    JOURNAL OF APPLIED PHYSICS, 2024, 135 (20)
  • [37] Reaction mechanism of aluminosilicate glasses in aqueous solution from reactive molecular dynamics simulations
    Kalahe, Jayani
    Mahadevan, Thiruvilla S.
    Urata, Shingo
    Du, Jincheng
    MATERIALS LETTERS, 2024, 374
  • [38] RMDff: A smoothly transitioning, forcefield-based representation of kinetics for reactive molecular dynamics simulations
    Smith, K. D.
    Stoliarov, S. I.
    Nyden, M. R.
    Westmoreland, P. R.
    MOLECULAR SIMULATION, 2007, 33 (4-5) : 361 - 368
  • [39] First-Principles-Based Kinetic Monte Carlo Model of Hydrogen Evolution Reaction under Realistic Conditions: Solvent, Hydrogen Coverage and Electric Field Effects
    Luo, Yuhong
    Guan, Yani
    Liu, Guihua
    Wang, Yanji
    Li, Jingde
    Ricardez-Sandoval, Luis
    ACS CATALYSIS, 2024, 14 (04) : 2696 - 2708
  • [40] A Closure Study of the Reaction between Sulfur Dioxide and the Sulfate Radical Ion from First-Principles Molecular Dynamics Simulations
    Tsona, Narcisse T.
    Bork, Nicolai
    Loukonen, Ville
    Vehkamaki, Hanna
    JOURNAL OF PHYSICAL CHEMISTRY A, 2016, 120 (07): : 1046 - 1050