The next-generation sequencing reveals the complete mitochondrial genome of Alosa sapidissima (Perciformes: Clupeidae) with phylogenetic consideration

被引：3
|
作者：
Wang, Jing [1 ]
Yu, Zeshu [1 ]
Wang, Xiang [1 ]
Yang, Shaosheng [2 ]
Zhang, Dongguo [2 ]
Zhang, Yong [1 ]
机构：
[1] Sun Yat Sen Univ, Inst Aquat Econ Anim, State Key Lab Biocontrol, Guangdong Prov Key Lab Aquat Econ Anim, Guangzhou 510275, Guangdong, Peoples R China
[2] Shenzhen South Ocean Technol Co Ltd, Shenzhen, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2017年 / 2卷 / 01期
关键词：
Alosa sapidissima; mitochondrial genome; phylogenetic analysis;
D O I：
10.1080/23802359.2017.1331322
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
The complete mitochondrial genome of the Alosa sapidissima is presented in this study. The mitochondrial genome is 16,741 bp long and consists of 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and a control region. The gene order and composition of Epinephelus awoara mitochondrial genome was similar to that of most other vertebrates. The nucleotide compositions of the light strand in descending order is 28.79% of G, 28.39% of T, 24.94% of A, and 17.88% of C. With the exception of the NADH dehydrogenase subunit 6 (ND6) and 8 tRNA genes, all other mitochondrial genes are encoded on the heavy strand. The phylogenetic analysis by maximum-likelihood (ML) method showed that the A. sapidissima has the closer relationship to between the A. alosa and A. pseudoharengus in the phylogenetic relationship.
引用
收藏
页码：304 / 306
页数：3
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