Transcription in Living Cells: Molecular Mechanisms of Bursting

被引:122
|
作者
Rodriguez, Joseph [1 ]
Larson, Daniel R. [2 ]
机构
[1] NIEHS, POB 12233, Res Triangle Pk, NC 27709 USA
[2] NCI, Ctr Canc Res, Bethesda, MD 20892 USA
来源
基金
美国国家卫生研究院;
关键词
transcription; single-molecule; single-cell; gene regulation; bursting; GENE-EXPRESSION; ENHANCER ACTIVITY; IMAGING REVEALS; HIGH-RESOLUTION; RNA; SINGLE; CHROMATIN; DYNAMICS; INITIATION; BINDING;
D O I
10.1146/annurev-biochem-011520-105250
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Transcription in several organisms from certain bacteria to humans has been observed to be stochastic in nature: toggling between active and inactive states. Periods of active nascent RNA synthesis known as bursts represent individual gene activation events in which multiple polymerases are initiated. Therefore, bursting is the single locus illustration of both gene activation and repression. Although transcriptional bursting was originally observed decades ago, only recently have technological advances enabled the field to begin elucidating gene regulation at the single-locus level. In this review, we focus on how biochemical, genomic, and single-cell data describe the regulatory steps of transcriptional bursts.
引用
收藏
页码:189 / 212
页数:24
相关论文
共 50 条
  • [41] IDENTIFICATION OF THE TRANSCRIPTION POTENTIAL OF LIVING CELLS WITH A MONOCOLONAL ANTIBODY
    WULFROTH, P
    PETZELT, C
    HAFNER, M
    GUNDLACH, H
    EUROPEAN JOURNAL OF CELL BIOLOGY, 1987, 43 : 65 - 65
  • [42] Intranuclear recruitment of transcription complexes in living pituitary cells
    Demarco, I
    Day, R
    PROCEEDINGS OF THE 12TH INTERNATIONAL CONGRESS OF ENDOCRINOLOGY, 2004, : 101 - 105
  • [43] Perfect timing: splicing and transcription rates in living cells
    Alpert, Tara
    Herzel, Lydia
    Neugebauer, Karla M.
    WILEY INTERDISCIPLINARY REVIEWS-RNA, 2017, 8 (02)
  • [44] Super-resolution imaging of transcription in living cells
    Cisse, Ibrahim
    PROTEIN SCIENCE, 2023, 32 (12)
  • [45] Measuring the Kinetics of mRNA Transcription in Single Living Cells
    Brody, Yehuda
    Shav-Tal, Yaron
    JOVE-JOURNAL OF VISUALIZED EXPERIMENTS, 2011, (54):
  • [46] The transcription cycle of RNA polymerase II in living cells
    Kimura, H
    Sugaya, K
    Cook, PR
    JOURNAL OF CELL BIOLOGY, 2002, 159 (05): : 777 - 782
  • [47] Enhancer and promoter coordination of transcription bursting and heterogeneity
    Chapus, F.
    Day, C.
    Rodriguez, J.
    MOLECULAR BIOLOGY OF THE CELL, 2023, 34 (02) : 1006 - 1006
  • [48] Transcription bursting and epigenetic plasticity: an updated view
    William F. Beckman
    Miguel Ángel Lermo Jiménez
    Pernette J. Verschure
    Epigenetics Communications, 1 (1):
  • [49] Time's up: Bursting out of Transcription
    Ford, Ethan
    Thanos, Dimitris
    CELL, 2009, 138 (03) : 430 - 432
  • [50] Synchronized transcription of the three C1q genes in dendritic cells - Molecular and chromosomal mechanisms
    Tan, Carol Shurong
    Chen, Guobao
    Teo, Dennis Boon Heng
    Lu, Jinhua
    IMMUNOBIOLOGY, 2012, 217 (11) : 1206 - 1206