Infinite Von Mises-Fisher Mixture Model and Its Application to Gene Expression Data Clustering

被引:0
|
作者
Zhu, Jiaojiao [1 ]
Fan, Wentao [1 ]
机构
[1] Huaqiao Univ, Coll Comp Sci & Technol, Xiamen, Peoples R China
基金
中国国家自然科学基金;
关键词
Dirichlet Process; von-Mises Fisher Mixture Model; Clustering; Variational Inference; Kd Tree; Gene Expression; VARIATIONAL INFERENCE;
D O I
10.1145/3461353.3461364
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
In some applications of data mining, clustering analysis of directional data is often involved. In this case, conventional model-based clustering methods are not suitable for fitting the data of such type of structure. Therefore, a Dirichlet Process Mixture Model based on von Mises-Fisher distribution was proposed for the clustering analysis of directional data. The main motivation is that as a non-parametric Bayesian model, The Dirichlet process can automatically determine the complexity of the mixture model when the number of data categories is unknown. We use the accelerated Variational inference algorithm to quickly estimate the parameters involved in the model, which enables the method to be applied in applications with large data scale. The validity of the proposed model was verified by using different scale simulation data and clustering analysis of gene expression data.
引用
收藏
页码:55 / 61
页数:7
相关论文
共 50 条
  • [21] Online Trans-dimensional von Mises-Fisher Mixture Models for User Profiles
    Qin, Xiangju
    Cunningham, Padraig
    Salter-Townshend, Michael
    [J]. JOURNAL OF MACHINE LEARNING RESEARCH, 2016, 17
  • [22] Scaled von Mises-Fisher Distributions and Regression Models for Paleomagnetic Directional Data
    Scealy, J. L.
    Wood, Andrew T. A.
    [J]. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2019, 114 (528) : 1547 - 1560
  • [23] Cross-entropy-based directional importance sampling with von Mises-Fisher mixture model for reliability analysis
    Zhang, Xiaobo
    Lu, Zhenzhou
    Cheng, Kai
    [J]. RELIABILITY ENGINEERING & SYSTEM SAFETY, 2022, 220
  • [24] Geodesic projection of the von Mises-Fisher distribution for projection pursuit of directional data
    Jung, Sungkyu
    [J]. ELECTRONIC JOURNAL OF STATISTICS, 2021, 15 (01): : 984 - 1033
  • [25] Hyperspherical von mises-fisher mixture (HvMF) modelling of high angular resolution diffusion MRI
    Bhalerao, Abhir
    Westin, Carl-Fredrik
    [J]. MEDICAL IMAGE COMPUTING AND COMPUTER-ASSISTED INTERVENTION - MICCAI 2007, PT 1, PROCEEDINGS, 2007, 4791 : 236 - +
  • [26] Robust Speaker Clustering using Mixtures of von Mises-Fisher Distributions for Naturalistic Audio Streams
    Dubey, Harishchandra
    Sangwan, Abhijeet
    Hansen, John H. L.
    [J]. 19TH ANNUAL CONFERENCE OF THE INTERNATIONAL SPEECH COMMUNICATION ASSOCIATION (INTERSPEECH 2018), VOLS 1-6: SPEECH RESEARCH FOR EMERGING MARKETS IN MULTILINGUAL SOCIETIES, 2018, : 3603 - 3607
  • [27] On the characteristic function of the matrix von Mises-Fisher distribution with application to SO(N)-deconvolution
    Kim, PT
    [J]. HIGH DIMENSIONAL PROBABILITY II, 2000, 47 : 477 - 492
  • [28] Simulation of the Matrix Bingham-von Mises-Fisher Distribution, With Applications to Multivariate and Relational Data
    Hoff, Peter D.
    [J]. JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS, 2009, 18 (02) : 438 - 456
  • [29] Social regularized von Mises–Fisher mixture model for item recommendation
    Aghiles Salah
    Mohamed Nadif
    [J]. Data Mining and Knowledge Discovery, 2017, 31 : 1218 - 1241
  • [30] ANALYSIS OF FREQUENCY-DEPENDENT BEHAVIOR OF ROOM REFLECTIONS USING SPHERICAL MICROPHONE MEASUREMENTS & VON MISES-FISHER CLUSTERING
    Bastine, Amy
    Abhayapala, Thushara D.
    Zhang, Jihui
    [J]. 2021 IEEE WORKSHOP ON APPLICATIONS OF SIGNAL PROCESSING TO AUDIO AND ACOUSTICS (WASPAA), 2021, : 156 - 160