Active site profile-based protein clustering is an efficient, accurate method to define protein functional groups

被引：0
|
作者：
Leuthaeuser, Janelle [1 ]
Harper, Angela [1 ]
Shea, Gabrielle [1 ]
Babbitt, Patricia [2 ]
Fetrow, Jacquelyn [1 ]
机构：
[1] Wake Forest Univ, Winston Salem, NC 27109 USA
[2] Univ Calif San Francisco, San Francisco, CA 94143 USA
来源：
PROTEIN SCIENCE | 2015年 / 24卷
关键词：
D O I：
暂无
中图分类号：
Q5 [生物化学]; Q7 [分子生物学];
学科分类号：
071010 ; 081704 ;
摘要：
PL-019
引用
收藏
页码：276 / 276
页数：1
相关论文
共 50 条
  • [31] A fast algorithm for estimating the statistical significance of protein alignments generated by profile-based methods
    Poleksic, Aleksandar
    Danzer, Joseph F.
    MATHEMATICS AND COMPUTERS IN BIOLOGY AND CHEMISTRY, 2008, : 22 - 26
  • [32] Protein Remote Homology Detection by Combining Chou's Pseudo Amino Acid Composition and Profile-Based Protein Representation
    Liu, Bin
    Wang, Xiaolong
    Zou, Quan
    Dong, Qiwen
    Chen, Qingcai
    MOLECULAR INFORMATICS, 2013, 32 (9-10) : 775 - 782
  • [33] FTIP: an accurate and efficient method for global protein surface comparison
    Zhang, Yuan
    Sui, Xing
    Stagg, Scott
    Zhang, Jinfeng
    BIOINFORMATICS, 2020, 36 (10) : 3056 - 3063
  • [34] Node Based Clustering Method on Protein-Protein Interaction Network
    Liu, Hao
    Liao, Bo
    Cao, Zhi
    Zhu, Wen
    Li, Renfa
    JOURNAL OF COMPUTATIONAL AND THEORETICAL NANOSCIENCE, 2009, 6 (10) : 2198 - 2202
  • [35] FTIP - An Accurate and Efficient Method for Global Protein Surface Comparison
    Zhang, Yuan
    Sui, Xin
    Stagg, Scott M.
    Zhang, Jinfeng
    BIOPHYSICAL JOURNAL, 2020, 118 (03) : 501A - 501A
  • [36] Efficient algorithms for accurate hierarchical clustering of huge datasets: tackling the entire protein space
    Loewenstein, Yaniv
    Portugaly, Elon
    Fromer, Menachem
    Linial, Michal
    BIOINFORMATICS, 2008, 24 (13) : I41 - I49
  • [37] Discovery of functional protein groups by clustering community links and integration of ontological knowledge
    McGarry, Ken
    EXPERT SYSTEMS WITH APPLICATIONS, 2013, 40 (13) : 5101 - 5112
  • [38] Active site mutations define the pathway for the cooperative activation of CAMP-dependent protein kinase
    Herberg, FW
    Taylor, SS
    Dostmann, WRG
    BIOCHEMISTRY, 1996, 35 (09) : 2934 - 2942
  • [39] Towards Site-based Protein Functional Annotations
    Lei, Seak Fei
    Huan, Jun
    2008 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE, PROCEEDINGS, 2008, : 193 - 198
  • [40] Functional Tuning of Photoactive Yellow Protein by Active Site Residue 46
    Philip, Andrew F.
    Eisenman, Kaury T.
    Papadantonakis, George A.
    Hoff, Wouter D.
    BIOCHEMISTRY, 2008, 47 (52) : 13800 - 13810
12345