A Linear-Time Algorithm for Hamming Distance with Shifts

被引：2

作者：

Jiang, Minghui ^{[1
]}

机构：

[1] Utah State Univ, Dept Comp Sci, Logan, UT 84322 USA

来源：

THEORY OF COMPUTING SYSTEMS | 2009年 / 44卷 / 03期

关键词：

Hamming distance; Swap distance; String algorithm; Combinatorial pattern matching;

D O I：

10.1007/s00224-007-9088-4

中图分类号：

TP301 [理论、方法];

学科分类号：

081202 ;

摘要：

The Hamming distance with shifts was introduced by Bookstein et al. as a generalization of the traditional Hamming distance to allow a tunable degree of fuzziness when comparing two binary sequences of the same length. We present a linear-time algorithm for computing this distance. The previous best time bound was quadratic.

引用

页码：349 / 355

页数：7

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