Dyella marensis sp nov., isolated from cliff soil

被引:24
|
作者
Lee, Dong Wan [1 ]
Lee, Soon Dong [1 ]
机构
[1] Cheju Natl Univ, Dept Sci Educ, Cheju 690756, South Korea
关键词
TREES; KOREA;
D O I
10.1099/ijs.0.000968-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A novel, Gram-negative bacterium, designated CS5-B2(T), was isolated from soil that had been collected from a cliff on Mara Island, Republic of Korea. Phylogenetic analyses based on 16S rRNA gene sequences showed that the strain fell within the radiation of the genus Dyella. The closest relatives were the type strains of Dyella koreensis, Dyella ginsengisoli and Dyella japonica and 16S rRNA gene sequence similarities between strain CS5-B2(T) and these strains were 99.0, 97.9 and 97.8 %, respectively. The sequence similarities between the novel isolate and other related taxa compared in the phylogenetic analysis were less than 96.7%. The cells of strain CS5-B2(T) were aerobic, oxidase-negative, catalase-positive, motile rods. The temperature range for growth was 20-37 degrees C, with optimal growth at 30-37 degrees C. Growth occurred at pH 5.1-9.1, with optimal growth at pH 6.1-9.1. NaCl tolerance for growth was from 1 to 2 % (w/v). Ubiquinone-8 was the predominant respiratory lipoquinone. The major fatty acids were iso-C-15:0 and iso-C-17:1 omega 9c. The G + C content of the DNA was 65.7-66.6 mol%. The level of DNA-DNA relatedness with D. koreensis KCTC 12359(T) was 20.2 and 29.6 % in duplicate measurements. On the basis of phenotypic features, phylogenetic analysis and DNA-DNA relatedness, a novel species of the genus Dyella is proposed, with the name Dyella marensis sp. nov. The type strain is CS5-B2(T) (=JCM 14959(T) =KCTC 22144(T)).
引用
收藏
页码:1397 / 1400
页数:4
相关论文
共 50 条
  • [31] Chitinophaga rupis sp nov., isolated from soil
    Lee, Dong Wan
    Lee, Jeong-Eon
    Lee, Soon Dong
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 2830 - 2833
  • [32] Niabella pedocola sp nov., isolated from soil
    Dahal, Ram Hari
    Kim, Jaisoo
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 2650 - 2656
  • [33] Nocardioides hankookensis sp nov., isolated from soil
    Yoon, Jung-Hoon
    Kang, So-Jung
    Lee, Mi-Hwa
    Oh, Tae-Kwang
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2008, 58 : 434 - 437
  • [34] Tsukamurella soli sp nov., isolated from soil
    Weon, Hang-Yeon
    Yoo, Seung-Hee
    Anandham, Rangasamy
    Schumann, Peter
    Kroppenstedt, Reiner M.
    Kwon, Soon-Wo
    Stackebrandt, Erko
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2010, 60 : 1667 - 1671
  • [35] Nocardioides terrigena sp nov., isolated from soil
    Yoon, Jung-Hoon
    Kang, So-Jung
    Lee, Soo-Young
    Oh, Tae-Kwang
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 2472 - 2475
  • [36] Variovorax dokdonensis sp nov., isolated from soil
    Yoon, JH
    Kang, SJ
    Oh, TK
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2006, 56 : 811 - 814
  • [37] Paenibacillus terrigena sp nov., isolated from soil
    Xie, Cheng-Hui
    Yokota, Akira
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 70 - 72
  • [38] Brevundimonas lenta sp nov., isolated from soil
    Yoon, Jung-Hoon
    Kang, So-Jung
    Lee, Jung-Sook
    Oh, Hyun Woo
    Oh, Tae-Kwang
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2007, 57 : 2236 - 2240
  • [39] Bacillus songklensis sp nov., isolated from soil
    Kang, Hyeonji
    Weerawongwiwat, Veeraya
    Kim, Jong-Hwa
    Sukhoom, Ampaitip
    Kim, Wonyong
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 : 4189 - 4195
  • [40] Microbacterium insulae sp nov., isolated from soil
    Yoon, Jung-Hoon
    Schumann, Peter
    Kang, So-Jung
    Lee, Chang-Soo
    Leel, Soo-Young
    Oh, Tae-Kwang
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 1738 - 1742