CoSinGAN: Learning COVID-19 Infection Segmentation from a Single Radiological Image

被引:25
|
作者
Zhang, Pengyi [1 ,2 ]
Zhong, Yunxin [1 ,2 ]
Deng, Yulin [1 ,2 ]
Tang, Xiaoying [1 ,2 ]
Li, Xiaoqiong [1 ,2 ]
机构
[1] Beijing Inst Technol, Sch Life Sci, Beijing 100081, Peoples R China
[2] Minist Ind & Informat Technol, Key Lab Convergence Med Engn Syst & Healthcare Te, Beijing 100081, Peoples R China
关键词
covid19 infection segmentation; generative model; single radiological image; conditional distribution; DISEASE; 2019; COVID-19; CHEST CT; DIAGNOSIS;
D O I
10.3390/diagnostics10110901
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Computed tomography (CT) images are currently being adopted as the visual evidence for COVID-19 diagnosis in clinical practice. Automated detection of COVID-19 infection from CT images based on deep models is important for faster examination. Unfortunately, collecting large-scale training data systematically in the early stage is difficult. To address this problem, we explore the feasibility of learning deep models for lung and COVID-19 infection segmentation from a single radiological image by resorting to synthesizing diverse radiological images. Specifically, we propose a novel conditional generative model, called CoSinGAN, which can be learned from a single radiological image with a given condition, i.e., the annotation mask of the lungs and infected regions. Our CoSinGAN is able to capture the conditional distribution of the single radiological image, and further synthesize high-resolution (512 x 512) and diverse radiological images that match the input conditions precisely. We evaluate the efficacy of CoSinGAN in learning lung and infection segmentation from very few radiological images by performing 5-fold cross validation on COVID-19-CT-Seg dataset (20 CT cases) and an independent testing on the MosMed dataset (50 CT cases). Both 2D U-Net and 3D U-Net, learned from four CT slices by using our CoSinGAN, have achieved notable infection segmentation performance, surpassing the COVID-19-CT-Seg-Benchmark, i.e., the counterparts trained on an average of 704 CT slices, by a large margin. Such results strongly confirm that our method has the potential to learn COVID-19 infection segmentation from few radiological images in the early stage of COVID-19 pandemic.
引用
收藏
页数:28
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