A signature of six-hypoxia-related genes to evaluate the tumor immune microenvironment and predict prognosis in gastric cancer

被引:4
|
作者
Zhou, Kena [1 ]
Cai, Congbo [2 ]
Ding, Guanjun [3 ]
He, Yi [1 ]
Hu, Di [1 ]
机构
[1] Ningbo 9 Hosp, Gastroenterol Dept, 68 Xiangbei Rd, Ningbo 315000, Zhejiang, Peoples R China
[2] Yinzhou 2 Hosp, Emergency Dept, Ningbo 315000, Zhejiang, Peoples R China
[3] Ningbo 9 Hosp, Gen Surg Dept, Ningbo 315000, Zhejiang, Peoples R China
关键词
Hypoxia; Gastric cancer; TME; Risk model; Immune response; HYPOXIA; TISSUE;
D O I
10.1186/s12920-022-01411-9
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
BackgroundHypoxia will trigger a series of immunosuppressive process in tumor microenvironment, leading to the progression in gastric cancer (GC). This research aims to establish a prognostic model made up of hypoxia-risk-related genes in GC.MethodsHypoxic genes were outlined via the protein-protein interaction network. And a prognostic model was developed using univariate cox analysis and lasso regression from data in TCGA. Two independent queues of GEO were used for validation.ResultsWe set up a hypoxic model presented as an independent prognostic factor for GC. And a nomogram combined this model with clinical features can predict OS with great performance. Furthermore, DNA methylation, IHC and cell line analyses validated the expression of hypoxic genes in GC.ConclusionsIn summary, we proposed and verified a hypoxia-risk-related model, which could reflect the immune microenvironment and predict prognosis in GC.
引用
收藏
页数:12
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