Geometric and Electronic Structure Contributions to Function in Non-heme Iron Enzymes

被引:138
|
作者
Solomon, Edward I. [1 ]
Light, Kenneth M. [1 ]
Liu, Lei V. [1 ]
Srnec, Martin [1 ]
Wong, Shaun D. [1 ]
机构
[1] Stanford Univ, Dept Chem, Stanford, CA 94305 USA
基金
美国国家卫生研究院;
关键词
HYDROGEN-ATOM ABSTRACTION; ACTIVATED BLEOMYCIN; HIGH-SPIN; COMPLEXES; MECHANISM; SPECTROSCOPY; ELUCIDATION; HALOGENASE; OXYGEN; HEME;
D O I
10.1021/ar400149m
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Mononuclear non-heme Fe (NHFe) enzymes play key roles in DNA repair, the biosynthesis of antibiotics, the response to hypoxia, cancer therapy, and many other biological processes. These enzymes catalyze a diverse range of oxidation reactions, including hydroxylation, halogenation, ring closure, desaturation, and electrophilic aromatic substitution (EAS). Most of these enzymes use an Fe-II site to activate dioxygen, but traditional spectroscopic methods have not allowed researchers to insightfully probe these ferrous active sites. We have developed a methodology that provides detailed geometric and electronic structure insights into these NHFeII active sites. Using these data, we have defined a general mechanistic strategy that many of these enzymes use: they control O-2 activation (and limit autoxidation and self-hydroxylation) by allowing Fe-II coordination unsaturation only in the presence of cosubstrates. Depending on the type of enzyme, O-2 activation either involves a 2e(-) reduced Fe-III-OOH intermediate or a 4e(-) reduced Fe-IV=O intermediate. Nuclear resonance vibrational spectroscopy (NRVS) has provided the geometric structure of these intermediates, and magnetic circular dichroism (MCD) has defined the frontier molecular orbitals (FMOs), the electronic structure that controls reactivity. This Account emphasizes that experimental spectroscopy is critical in evaluating the results of electronic structure calculations. Therefore these data are a key mechanistic bridge between structure and reactivity. For the Fe-III-OOH intermediates, the anticancer drug activated bleomycin (BLM) acts as the non-heme Fe analog of compound 0 in heme (e.g., P450) chemistry. However BLM shows different reactivity: the low-spin (LS) Fe-III-OOH can directly abstract a H atom from DNA. The LS and high-spin (HS) Fe-III-OOHs have fundamentally different transition states. The IS transition state goes through a hydroxyl radical, but the HS transition state is activated for EAS without O-O deavage. This activation is important in one class of NHFe enzymes that utilizes a HS Fe-III-OOH intermediate in dioxygenation. For Fe-IV=O intermediates, the IS form has a pi-type FMO activated for attack perpendicular to the Fe-O bond. However, the HS form (present in the NHFe enzymes) has a pi FMO activated perpendicular to the Fe-O bond and a sigma FMO positioned along the Fe-O bond. For the NHFe enzymes, the presence of pi rand sigma FMOs enables enzymatic control in determining the type of reactivity: EAS or H-atom extraction for one substrate with different enzymes and halogenation or hydroxylation for one enzyme with different substrates.
引用
收藏
页码:2725 / 2739
页数:15
相关论文
共 50 条
  • [1] Geometric and electronic structure contributions to function in non-heme iron enzymes
    Solomon, EI
    JOURNAL OF INORGANIC BIOCHEMISTRY, 1999, 74 (1-4) : 5 - 5
  • [2] Geometric and electronic structure/function correlations in non-heme iron enzymes
    Solomon, EI
    Brunold, TC
    Davis, MI
    Kemsley, JN
    Lee, SK
    Lehnert, N
    Neese, F
    Skulan, AJ
    Yang, YS
    Zhou, J
    CHEMICAL REVIEWS, 2000, 100 (01) : 235 - 349
  • [3] Geometric and electronic structure contributions to function in bioinorganic chemistry: Active sites in non-heme iron enzymes
    Solomon, EI
    INORGANIC CHEMISTRY, 2001, 40 (15) : 3656 - 3669
  • [4] Geometric and electronic structure/function correlations in non-heme iron enzymes.
    Solomon, EI
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2002, 223 : A34 - A34
  • [5] Geometric and electronic structure contributions to function in bioinorganic chemistry: Active sites in non-heme iron enzymes.
    Solomon, EI
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2001, 221 : U682 - U683
  • [6] Structure/function correlations over non-heme iron enzymes
    Solomon, Edward
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2015, 249
  • [7] Structure/function correlations over non-heme iron enzymes
    Solomon, EI
    JOURNAL OF INORGANIC BIOCHEMISTRY, 2003, 96 (01) : 62 - 62
  • [8] Structure/function relations in binuclear non-heme iron enzymes
    Boettger, Lars H.
    Light, Kenneth M.
    Knoot, Cory
    Farrugia, Mark
    Park, Kiyoung
    Sutherlin, Kyle D.
    Libscomb, John D.
    Shanklin, John
    Hausinger, Robert P.
    Solomon, Edward I.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2014, 248
  • [9] Structure/function correlations over non-heme iron enzymes
    Solomon, Edward I.
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2014, 248
  • [10] Structure/function correlations over non-heme iron enzymes.
    Solomon, EI
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2004, 227 : U1423 - U1423