Draft genome sequence of Cercospora canescens: a leaf spot causing pathogen

被引:0
|
作者
Chand, Ramesh [1 ]
Pal, Chhattar [1 ]
Singh, Vineeta [1 ]
Kumar, Manoj [1 ,2 ]
Singh, Vinay Kumar [3 ]
Chowdappa, Pallem [4 ]
机构
[1] Banaras Hindu Univ, Inst Agr Sci, Dept Mycol & Plant Pathol, Varanasi 221005, Uttar Pradesh, India
[2] Banaras Hindu Univ, Fac Sci, Dept Biochem, Varanasi 221005, Uttar Pradesh, India
[3] Banaras Hindu Univ, Sch Biotechnol, Ctr Bioinformat, Varanasi 221005, Uttar Pradesh, India
[4] ICAR Cent Plantat Crops Res Inst, Kudlu 671124, India
来源
CURRENT SCIENCE | 2015年 / 109卷 / 11期
关键词
Cercospora canescens; functional annotation; gene prediction; sequencing and assembly; Vigna radiata; MAGNAPORTHE-GRISEA; ZEAE-MAYDIS; SSR-MARKERS; MAP KINASE; GENE; PLANT; GROWTH; BLAST; GENERATION; RESISTANT;
D O I
暂无
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Cercospora canescens (Ellis and Martin) is a hemibiotrophic pathogen causing leaf spot disease on mungbean (Vigna radiata L). Genome sequence (similar to 33.97 Mb) assembled in 8239 contigs with 10627 protein coding genes. A total of 2842 proteins were identified as homologous of 223 predicted and 7562 putative un-characterized involved in biological processes, molecular functions. The identified proteins are mainly involved in infection process used to compromise nutrients or destroy host tissues, the gycosidases, transposases and cytochrome P450s genes codes to signal transduction, cell wall breakdown, transporters, host stomata perception, adhesion, polyketide synthase and cercosporin. A total of 528 simple sequence repeats were also identified from the genome sequence assembly of C. canescens. This study provides insights into pathogenic mechanism and a better understanding of virulence differentiation of C. canescens. It will also help in identification of similarity and differences in regions among the genomes of different species of Cercospora.
引用
收藏
页码:2103 / 2110
页数:8
相关论文
共 50 条
  • [1] Complete Genome Sequence Resource for Cercospora apii Causing Leaf Spot of Celery
    Yang, Lijuan
    Gao, Guoxun
    Gao, Wei
    Zhang, Chunxiang
    Wu, Feng
    Huo, Jianfei
    Wang, Yong
    MOLECULAR PLANT-MICROBE INTERACTIONS, 2023, 36 (10) : 670 - 673
  • [2] Draft Genome Sequence of Cercospora arachidicola, Causal Agent of Early Leaf Spot in Peanuts
    Orner, Valerie A.
    Cantonwine, Emily G.
    Wang, Xinye Monica
    Abouelleil, Amr
    Bochicchio, James
    Nusbaum, Chad
    Culbreath, Albert K.
    Abdo, Zaid
    Arias, Renee S.
    GENOME ANNOUNCEMENTS, 2015, 3 (06)
  • [3] Genetic diversity study of Cercospora canescens (Ellis & Martin) isolates, the pathogen of Cercospora leaf spot in legumes
    Joshi, A
    Souframanien, J
    Chand, R
    Pawar, SE
    CURRENT SCIENCE, 2006, 90 (04): : 564 - 568
  • [4] Draft Genome Sequence Resource for Blumeriella jaapii, the Cherry Leaf Spot Pathogen
    Peng, Jingyu
    Rojas, J. Alejandro
    Sang, Hyunkyu
    Proffer, Tyre J.
    Outwater, Cory A.
    Vilgalys, Rytas
    Sundin, George W.
    PHYTOPATHOLOGY, 2020, 110 (09) : 1507 - 1510
  • [5] Genome sequencing and annotation of Cercospora sesami, a fungal pathogen causing leaf spot to Sesamum indicum
    Sinha, Shagun
    Navathe, Sudhir
    Singh, Sakshi
    Gupta, Deepak K.
    Kharwar, Ravindra Nath
    Chand, Ramesh
    3 BIOTECH, 2023, 13 (02)
  • [6] Genetic diversity study of Cercospora canescens (Ellis & Martin) isolates, the pathogen of Cercospora leaf spot in legumes
    Nuclear Agriculture and Biotechnology Division, Bhabha Atomic Research Center, Mumbai 400 085, India
    不详
    Curr. Sci., 2006, 4 (564-568):
  • [7] Genome sequencing and annotation of Cercospora sesami, a fungal pathogen causing leaf spot to Sesamum indicum
    Shagun Sinha
    Sudhir Navathe
    Sakshi Singh
    Deepak K. Gupta
    Ravindra Nath Kharwar
    Ramesh Chand
    3 Biotech, 2023, 13
  • [8] Draft genome sequence of Colletotrichum fructicola causing leaf spot on tea plants (Camellia sinensis)
    Lv, Wuyun
    Jiang, Hong
    Li, Xiaolong
    Lu, Qinhua
    Wang, Xinchao
    Wang, Yuchun
    PLANT PATHOLOGY, 2024, 73 (01) : 144 - 156
  • [9] Draft Genome Sequence of Alternaria longipes Causing Tobacco Brown Spot
    Feng, Zhonghong
    Li, Yaxin
    Ma, Xueyan
    Duan, Yangbo
    Zhang, Rong
    Hsiang, Tom
    Niu, Yongchun
    Sun, Guangyu
    PLANT DISEASE, 2022, 106 (02) : 734 - 736
  • [10] Phytotonic effect of carbendazim on greengram (Phaseolus radiatus) and control of cercospora leaf-spot (Cercospora canescens)
    Chand, R
    Lal, M
    Chaurasia, S
    INDIAN JOURNAL OF AGRICULTURAL SCIENCES, 2003, 73 (10): : 572 - 573