Simple Logic Computation Based on the DNA Strand Displacement

被引:10
|
作者
Wang, Yanfeng [1 ]
Tian, Guihua [1 ]
Hou, Hewei [1 ]
Ye, Mengmeng [1 ]
Cui, Guangzhao [1 ]
机构
[1] Zhengzhou Univ Light Ind, Coll Elect & Elect Engn, Zhengzhou 450002, Peoples R China
关键词
DNA Strand Displacement; Full Adder; Visual DSD; NEURAL P SYSTEMS; NETWORKS; GATES;
D O I
10.1166/jctn.2014.3596
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
DNA strand displacement techniques are increasingly used in majority computing mechanism, ranging from logic gates to reaction networks. Strand displacement reaction which is based on the principle of Watson-Crick complementary base pairing, enables the computation of logic circuit to be implemented through toehold-mediated with enzyme-free, allowing different domain sequences to be programmed solely, including seesawing reaction, threshold reaction and reporting reaction. In this paper, the logic circuits for implementing full adder are designed and translated equivalently into dual-rail circuit, into seesaw cascade circuit performed by DNA strand displacement reaction. The whole reaction process can be programmed and simulated in the software Visual DSD which presents details of simulation result through compiling the code for computation device. The validity of computation result of full adder further demonstrates that the DNA strand displacement is a desirable method for implementing more complicated logic computation and reaction network.
引用
收藏
页码:1975 / 1982
页数:8
相关论文
共 50 条
  • [1] A DNA Logic Model Based on DNA Strand Displacement
    Wang, Zicheng
    Ai, Jian
    Wang, Yanfeng
    Cui, Guangzhao
    [J]. JOURNAL OF NANOELECTRONICS AND OPTOELECTRONICS, 2017, 12 (12) : 1343 - 1349
  • [2] Towards Temporal Logic Computation Using DNA Strand Displacement Reactions
    Lakin, Matthew R.
    Stefanovic, Darko
    [J]. UNCONVENTIONAL COMPUTATION AND NATURAL COMPUTATION, UCNC 2017, 2017, 10240 : 41 - 55
  • [3] Exponential Function Computation Based on DNA Strand Displacement Circuits
    Wang, Yanfeng
    Mao, Tongtong
    Sun, Junwei
    Liu, Peng
    [J]. IEEE TRANSACTIONS ON BIOMEDICAL CIRCUITS AND SYSTEMS, 2022, 16 (03) : 479 - 488
  • [4] Four-Analog Computation Based on DNA Strand Displacement
    Zou, Chengye
    Wei, Xiaopeng
    Zhang, Qiang
    Liu, Chanjuan
    Zhou, Changjun
    Liu, Yuan
    [J]. ACS OMEGA, 2017, 2 (08): : 4143 - 4160
  • [5] Molecular logic gates based on localized DNA strand displacement
    Wang Y.
    Zhang W.
    Li X.
    Cui G.
    [J]. Journal of Computational and Theoretical Nanoscience, 2016, 13 (06) : 3948 - 3952
  • [6] Molecular Logic Gate Based on DNA Strand Displacement Reaction
    Ma, Jingjing
    [J]. JOURNAL OF NANOELECTRONICS AND OPTOELECTRONICS, 2021, 16 (06) : 974 - 977
  • [7] DNA and DNA computation based on toehold-mediated strand displacement reactions
    Guo, Yijun
    Wei, Bing
    Sun, Xianbao
    Yao, Dongbao
    Zhou, Xiang
    Xiao, Shiyan
    Liang, Haojun
    [J]. INTERNATIONAL JOURNAL OF MODERN PHYSICS B, 2018, 32 (18):
  • [8] Analog Computation by DNA Strand Displacement Circuits
    Song, Tianqi
    Garg, Sudhanshu
    Mokhtar, Reem
    Bui, Hieu
    Reif, John
    [J]. ACS SYNTHETIC BIOLOGY, 2016, 5 (08): : 898 - 912
  • [9] Circular DNA Logic Gates with Strand Displacement
    Zhang, Cheng
    Yang, Jing
    Xu, Jin
    [J]. LANGMUIR, 2010, 26 (03) : 1416 - 1419
  • [10] DNA dynamics and computation based on toehold-free strand displacement
    Kang, Hong
    Lin, Tong
    Xu, Xiaojin
    Jia, Qing-Shan
    Lakerveld, Richard
    Wei, Bryan
    [J]. NATURE COMMUNICATIONS, 2021, 12 (01)