Predicting the toxicities of metal oxide nanoparticles based on support vector regression with a residual bootstrapping method

被引:6
|
作者
Zhai, Xiuyun [1 ,2 ]
Chen, Mingtong [3 ]
Lu, Wencong [4 ]
机构
[1] Shanghai Univ, Sch Mat Sci & Engn, Shanghai, Peoples R China
[2] Panzhihua Univ, Sch Mech Engn, Panzhihua, Peoples R China
[3] Panzhihua Univ, Mat Engn Sch, Panzhihua, Peoples R China
[4] Shanghai Univ, Coll Sci, Shanghai 200444, Peoples R China
关键词
Quantitative structure-activity relationship; support vector regression; residual bootstrapping; metal oxide nanoparticles; toxicity; MATERIALS DESIGN; CYTOTOXICITY; SELECTION; QSAR; NANOMATERIALS; VALIDATION; MACHINE; BINARY;
D O I
10.1080/15376516.2018.1449278
中图分类号
R99 [毒物学(毒理学)];
学科分类号
100405 ;
摘要
For safely using the untested metal oxide nanoparticls (MONPs) in industrial and commercial applications, it is important to predict their potential toxicities quickly and efficiently. In this research, the quantitative structure-activity relationship (QSAR) model based on support vector regression (SVR) with a residual bootstrapping technique (BTSVR) was proposed to predict the toxicities of MONPs. It was found that the main features influencing the toxicities of MONPs were RA(atom) (atomic ratio of oxygen to metal),Delta H-m (enthalpy of melting), and E-coh (cohesive energy). The QSPR model constructed was robust and self-explanatory in predicting the toxicities of MONPs with the coefficient of determination (R-2) of 0.87 and the root mean square error (RMSE) of 0.184 for the training sets, and R-2 of 0.84 and RMSE of 0.217 for the testing sets, respectively. The performance of our model is much better than that published. Moreover, our model was validated by the external testing sets 1000 times. Therefore, it is expected that the method presented here can be used to construct powerful model in predicting the toxicities of MONPs untested or even unavailable.
引用
收藏
页码:440 / 449
页数:10
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