Novel structural tree of (α plus β)-proteins containing abCd units

被引：5

作者：

Gordeev, A. B. ^{[1
]}

Efimov, A. V. ^{[1
]}

机构：

[1] Russian Acad Sci, Inst Prot Res, Pushchino 142290, Moscow Region, Russia

来源：

MOLECULAR BIOLOGY | 2009年 / 43卷 / 03期

基金：

俄罗斯基础研究基金会;

关键词：

modeling; classification; database; protein folding; structural motif; structural similarity; PROTEIN; CLASSIFICATION; SEQUENCES; SCOP; CATH;

D O I：

10.1134/S0026893309030169

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

A database of 926 (alpha + beta)-proteins and (alpha + beta)-domains containing abCd units, including 401 non-homologous, was compiled from the Protein Data Bank (total of 2636 PDB entries). A novel structural tree of this structural class of proteins was constructed to include 286 possible polypeptide chain folds. A structural classification of (alpha + beta)-proteins containing abCd unit was developed on the basis of the structural tree. The database and the structural tree are available at http://strees.protres.ru.

引用

页码：480 / 484

页数：5

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