Bisociative Literature-Based Discovery: Lessons Learned and New Word Embedding Approach

被引:2
|
作者
Lavrac, Nada [1 ,2 ]
Martinc, Matej [1 ,3 ]
Pollak, Senja [1 ]
Novak, Marusa Pompe [4 ]
Cestnik, Bojan [1 ,5 ]
机构
[1] Jozef Stefan Inst, Jamova 39, Ljubljana 1000, Slovenia
[2] Univ Nova Gorica, Vipayska 13, Nova Gorica 5000, Slovenia
[3] Jozef Stefan Int, Postgrad Sch, Jamova 39, Ljubljana 1000, Slovenia
[4] Natl Inst Biol, Vecna Pot 111, Ljubljana 1000, Slovenia
[5] Temida Doo, Dunajska Cesta 51, Ljubljana 1000, Slovenia
基金
欧盟地平线“2020”;
关键词
Literature-based discovery; Cross-domain bisociations; Computational creativity; Embeddings technology; MAGNESIUM; MIGRAINE;
D O I
10.1007/s00354-020-00108-w
中图分类号
TP3 [计算技术、计算机技术];
学科分类号
0812 ;
摘要
The field of bisociative literature-based discovery aims at mining scientific literature to reveal yet uncovered connections between different fields of specialization. This paper outlines several outlier-based literature mining approaches to bridging term detection and the lessons learned from selected biomedical literature-based discovery applications. The paper addresses also new prospects in bisociative literature-based discovery, proposing an advanced embeddings-based technology for cross-domain literature mining.
引用
下载
收藏
页码:773 / 800
页数:28
相关论文
共 50 条
  • [31] SUPPORTING A LITERATURE-BASED APPROACH ACROSS THE CURRICULUM
    SANACORE, J
    JOURNAL OF READING, 1993, 37 (03): : 240 - 244
  • [32] Emerging approaches in literature-based discovery: techniques and performance review
    Sebastian, Yakub
    Siew, Eu-Gene
    Orimaye, Sylvester O.
    KNOWLEDGE ENGINEERING REVIEW, 2017, 32 : 1 - 35
  • [33] Using Literature-Based Discovery to Explain Adverse Drug Effects
    Hristovski, Dimitar
    Kastrin, Andrej
    Dinevski, Dejan
    Burgun, Anita
    Ziberna, Lovro
    Rindflesch, Thomas C.
    JOURNAL OF MEDICAL SYSTEMS, 2016, 40 (08)
  • [34] LION LBD: a literature-based discovery system for cancer biology
    Pyysalo, Sampo
    Baker, Simon
    Ali, Imran
    Haselwimmer, Stefan
    Shah, Tejas
    Young, Andrew
    Guo, Yufan
    Hogberg, Johan
    Stenius, Ulla
    Narita, Masashi
    Korhonen, Anna
    BIOINFORMATICS, 2019, 35 (09) : 1553 - 1561
  • [35] Using statistical and knowledge-based approaches for literature-based discovery
    Yetisgen-Yildiz, Meliha
    Pratt, Wanda
    JOURNAL OF BIOMEDICAL INFORMATICS, 2006, 39 (06) : 600 - 611
  • [36] A Directional Recognition Algorithm of Semantic Relation for Literature-Based Discovery
    Liu, Xiaoyong
    Fu, Hui
    Jiang, Chaoyong
    ADVANCES IN SWARM INTELLIGENCE, ICSI 2016, PT II, 2016, 9713 : 281 - 288
  • [37] Learning the heterogeneous bibliographic information network for literature-based discovery
    Sebastian, Yakub
    Siew, Eu-Gene
    Orimaye, Sylvester Olubolu
    KNOWLEDGE-BASED SYSTEMS, 2017, 115 : 66 - 79
  • [38] A Literature-Based Approach to a Narco-Network
    Espinal-Enriquez, Jesus
    Mario Siqueiros-Garcia, J.
    Garcia-Herrera, Rodrigo
    Antonio Alcala-Corona, Sergio
    SOCIAL INFORMATICS, 2015, 8852 : 97 - 101
  • [39] Using literature-based discovery to identify disease candidate genes
    Hristovski, D
    Peterlin, B
    Mitchell, JA
    Humphrey, SM
    INTERNATIONAL JOURNAL OF MEDICAL INFORMATICS, 2005, 74 (2-4) : 289 - 298
  • [40] Online tools to support literature-based discovery in the life sciences
    Weeber, M
    Kors, JA
    Mons, B
    BRIEFINGS IN BIOINFORMATICS, 2005, 6 (03) : 277 - 286