Cancer;
high content analysis;
phenotypic screening;
RNAi screening;
statistical analysis;
D O I:
10.2174/1386207317666140323133249
中图分类号:
Q5 [生物化学];
学科分类号:
071010 ;
081704 ;
摘要:
The RNAi Screening Facility at the Cancer Research UK Beatson Institute combines siRNA genome-wide screening with drug screening coupled with High Content Imaging and fluorescence-based phenotypic assays to target multiple types of cancer. Here, we describe the infrastructure of the Facility and the approaches we utilise. We also share our experiences in running such a facility and developing and executing screening campaigns, with particular regard to high content multiparametric analysis, data management and statistical analysis.
机构:
Univ Michigan Hlth Syst, Dept Radiol, 1500 E Med Ctr Dr, Ann Arbor, MI 48109 USA
Univ Michigan, Inst Healthcare Policy & Innovat, Ann Arbor, MI 48109 USAUniv Michigan Hlth Syst, Dept Radiol, 1500 E Med Ctr Dr, Ann Arbor, MI 48109 USA
Carlos, Ruth C.
Sicks, JoRean D.
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Brown Univ, Ctr Stat Sci, ECOG ACRIN Biostat & Data Management Ctr, Providence, RI 02912 USAUniv Michigan Hlth Syst, Dept Radiol, 1500 E Med Ctr Dr, Ann Arbor, MI 48109 USA
Sicks, JoRean D.
Chiles, Caroline
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Wake Forest Univ, Hlth Sci Ctr, Dept Radiol, Winston Salem, NC 27109 USAUniv Michigan Hlth Syst, Dept Radiol, 1500 E Med Ctr Dr, Ann Arbor, MI 48109 USA
Chiles, Caroline
Gansauer, Lucy
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Spartanburg Med Ctr, Spartanburg, SC USAUniv Michigan Hlth Syst, Dept Radiol, 1500 E Med Ctr Dr, Ann Arbor, MI 48109 USA
Gansauer, Lucy
Kamen, Charles S.
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Univ Rochester, Canc Control Unit, Rochester, NY USAUniv Michigan Hlth Syst, Dept Radiol, 1500 E Med Ctr Dr, Ann Arbor, MI 48109 USA
Kamen, Charles S.
Kazak, Anne E.
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Nemours Childrens Hlth Syst, Nemours Ctr Healthcare Delivery Sci, Delaware, OH USAUniv Michigan Hlth Syst, Dept Radiol, 1500 E Med Ctr Dr, Ann Arbor, MI 48109 USA
Kazak, Anne E.
Neuman, Heather B.
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Univ Wisconsin, Dept Surg, Madison, WI USAUniv Michigan Hlth Syst, Dept Radiol, 1500 E Med Ctr Dr, Ann Arbor, MI 48109 USA
Neuman, Heather B.
Unger, Joseph M.
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Fred Hutchinson Canc Res Ctr, Publ Hlth Sci, SWOG Stat & Data Management Ctr, 1124 Columbia St, Seattle, WA 98104 USAUniv Michigan Hlth Syst, Dept Radiol, 1500 E Med Ctr Dr, Ann Arbor, MI 48109 USA
Unger, Joseph M.
Weaver, Kathryn E.
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Wake Forest Univ, Bowman Gray Sch Med, Dept Social Sci & Hlth Policy, Med Ctr Blvd, Winston Salem, NC USAUniv Michigan Hlth Syst, Dept Radiol, 1500 E Med Ctr Dr, Ann Arbor, MI 48109 USA
机构:
Newcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, EnglandNewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England
Malcomson, Fiona C.
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Parra-Soto, Solange
Lu, Liya
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Newcastle Univ, Populat Hlth Sci Inst, Ctr Canc, Newcastle Upon Tyne, EnglandNewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England
Lu, Liya
Ho, Frederick K.
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Univ Glasgow, Sch Hlth & Wellbeing, Glasgow City, ScotlandNewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England
Ho, Frederick K.
Perez-Cornago, Aurora
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Univ Oxford, Nuffield Dept Populat Hlth, Canc Epidemiol Unit, Oxford, EnglandNewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England
Perez-Cornago, Aurora
Shams-White, Marissa M.
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NCI, Epidemiol & Genom Res Program, Div Canc Control & Populat Sci, Risk Factor Assessment Branch, Bethesda, MD USANewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England
Shams-White, Marissa M.
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Van Zutphen, Moniek
Kampman, Ellen
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Wageningen Univ & Res, Div Human Nutr & Hlth, Wageningen, NetherlandsNewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England
Kampman, Ellen
Winkels, Renate M.
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Wageningen Univ & Res, Div Human Nutr & Hlth, Wageningen, NetherlandsNewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England
Winkels, Renate M.
Mitrou, Panagiota
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机构:
World Canc Res Fund Int, London, EnglandNewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England
Mitrou, Panagiota
Wiseman, Martin
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World Canc Res Fund Int, London, EnglandNewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England
Wiseman, Martin
Romaguera, Dora
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Hlth Res Inst Balear Isl IdISBa, Palma De Mallorca, Spain
CIBER Physiopathol Obes & Nutr CIBEROBN, Madrid, SpainNewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England
Romaguera, Dora
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Celis-Morales, Carlos
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Sharp, Linda
Mathers, John C.
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Newcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, EnglandNewcastle Univ, Populat Hlth Sci Inst, Human Nutr & Exercise Res Ctr, Ctr Healthier Lives, Newcastle Upon Tyne, England