Hymenobacter ruber sp nov., isolated from grass soil

被引:18
|
作者
Jin, Long [1 ]
Lee, Hyung-Gwan [1 ]
Kim, Song-Gun [2 ]
Lee, Keun Chul [2 ]
Ahn, Chi-Yong [1 ]
Oh, Hee-Mock [1 ]
机构
[1] Korea Res Inst Biosci & Biotechnol, Environm Biotechnol Res Ctr, Taejon 305806, South Korea
[2] Korea Res Inst Biosci & Biotechnol, Biol Resource Ctr, Taejon 305806, South Korea
关键词
D O I
10.1099/ijs.0.057976-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A taxonomic study using a polyphasic approach was performed on a Gram-stain-negative, aerobic, non-motile, non-spore-forming, rod-shaped bacterium, designated strain PB156(T), isolated from grass soil. Comparative 16S rRNA gene sequence studies showed that the isolate was clearly affiliated with the phylum Bacteroidetes, and most closely related to Hymenobacter soli PB17(T), Hymenobacter antarcticus VUG-A42aa(T) and Hymenobacter glaciei VUG-A130(T), showing 96.4, 96.2 and 95.9% 16S rRNA gene sequence similarity, respectively, while all other species of the genus shared only 89.3-95.2% similarity. The main polyamine present was symhomospermidine. The predominant menaquinone was MK-7. The major fatty acids were C-15:0 iso, summed feature 3 (C-16:1 omega 6c and/or C-16:1 omega 7c/t), C-16:1 omega 5c and C-15:0 anteiso. The G+C content of the genomic DNA of strain PB156(T) was 61.7 mol%. The combined genotypic and phenotypic data supported the conclusion that strain PB156(T) represents a novel species of the genus Hymenobacter, for which the name Hymenobacter ruber sp. nov. is proposed. The type strain is PB156(T) (=KCTC 32477(T)=JCM 19433(T)).
引用
收藏
页码:979 / 983
页数:5
相关论文
共 50 条
  • [21] Hymenobacter terrenus sp nov., isolated from biological soil crusts
    Tang, Kai
    Yuan, Bo
    Lai, Qiliang
    Wang, Ruigang
    Bao, Haizhu
    Feng, Fu Ying
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2015, 65 : 4557 - 4562
  • [22] Hymenobacter rubripertinctus sp nov., isolated from Antarctic tundra soil
    Jiang, Fan
    Danzeng, Wangmu
    Zhang, Yuming
    Zhang, Yan
    Jiang, Li
    Liu, Jia
    Lu, Lu
    Fan, Wei
    Peng, Fang
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (02) : 663 - 668
  • [23] Hymenobacter terricola sp. nov., isolated from Antarctic soil
    Chen, Ya
    Zhu, Lin
    Bai, Pengze
    Cui, Siqi
    Xin, Yuhua
    Zhang, Ying
    Zhang, Jianli
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2022, 72 (01)
  • [24] Hymenobacter pedocola sp nov., a novel bacterium isolated from soil
    Lim, Soo-Jeong
    Ten, Leonid N.
    Kim, Byung-Oh
    Kang, In-Kyu
    Jung, Hee-Young
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2018, 68 (07) : 2242 - 2248
  • [25] Hymenobacter terrae sp. nov., a Bacterium Isolated from Soil
    Sathiyaraj Srinivasan
    Jae-Jin Lee
    Kyoung Ryun Park
    Se-Hee Park
    Hee-Young Jung
    Myung Kyum Kim
    Current Microbiology, 2015, 70 : 643 - 650
  • [26] Hymenobacter rubidus sp. nov., bacterium isolated from a soil
    Jae-Jin Lee
    Eun Sun Joo
    Eun Bit Kim
    Seon Hwa Jeon
    Sathiyaraj Srinivasan
    Hee-Young Jung
    Myung Kyum Kim
    Antonie van Leeuwenhoek, 2016, 109 : 457 - 466
  • [27] Hymenobacter humi sp. nov., a bacterium isolated from soil
    Sathiyaraj Srinivasan
    Eun Sun Joo
    Jae-Jin Lee
    Myung Kyum Kim
    Antonie van Leeuwenhoek, 2015, 107 : 1411 - 1419
  • [28] Hymenobacter agri sp nov., a novel bacterium isolated from soil
    Han, Jigon
    Ten, Leonid N.
    Lee, Dong Hoon
    Kang, In-Kyu
    Jung, Hee-Young
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2018, 111 (10): : 1815 - 1823
  • [29] Hymenobacter koreensis sp nov and Hymenobacter saemangeumensis sp nov., isolated from estuarine water
    Kang, Ji Young
    Chun, Jeesun
    Choi, Ahyoung
    Moon, Sung Hyun
    Cho, Jang-Cheon
    Jahng, Kwang Yeop
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 : 4568 - 4573
  • [30] Hymenobacter latericoloratus sp nov and Hymenobacter luteus sp nov., isolated from freshwater sediment
    Liu, Lan
    Zhou, En-Min
    Jiao, Jian-Yu
    Manikprabhu, Deene
    Ming, Hong
    Liu, Wei-Hong
    Hozzein, Wael N.
    Shu, Wen-Sheng
    Li, Wen-Jun
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2015, 107 (01): : 165 - 172