TiProD: the Tissue-specific Promoter Database

被引:23
|
作者
Chen, Xin
Wu, Jian-min
Hornischer, Klaus
Kel, Alexander
Wingender, Edgar [1 ]
机构
[1] Peking Univ, Natl Lab Prot Engn & Plant Genet Engn, Coll Life Sci, Ctr Bioinformat, Beijing 100871, Peoples R China
[2] BIOBASE GmbH, D-38304 Wolfenbuttel, Germany
[3] Univ Gottingen, UKG, Dept Bioinformat, D-37077 Gottingen, Germany
关键词
D O I
10.1093/nar/gkj113
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
TiProD is a database of human promoter sequences for which some functional features are known. It allows a user to query individual promoters and the expression pattern they mediate, gene expression signatures of individual tissues, and to retrieve sets of promoters according to their tissue-specific activity or according to individual Gene Ontology terms the corresponding genes are assigned to. We have defined a measure for tissue-specificity that allows the user to discriminate between ubiquitously and specifically expressed genes. The database is accessible at http://tiprod.cbi.pku.edu.cn:8080/index.html.
引用
收藏
页码:D104 / D107
页数:4
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