Genome-wide association studies (GWAS) and their importance in asthma

被引:16
|
作者
Garcia-Sanchez, A. [1 ,2 ]
Isidoro-Garcia, M. [2 ,3 ,4 ]
Garcia-Solaesa, V. [2 ,3 ]
Sanz, C. [2 ,5 ]
Hernandez-Hernandez, L. [1 ,2 ]
Padron-Morales, J. [3 ]
Lorente-Toledano, F. [1 ,2 ,6 ]
Davila, I. [1 ,2 ,7 ]
机构
[1] Univ Salamanca, Dept Pediat, E-37008 Salamanca, Spain
[2] Inst Biosanitario Salamanca IBSAL, Grp Alergia, Salamanca, Spain
[3] Complejo Asistencial Univ Salamanca, Serv Bioquim Clin, Salamanca, Spain
[4] Univ Salamanca, Dept Med, E-37008 Salamanca, Spain
[5] Univ Salamanca, Dept Genet & Microbiol, E-37008 Salamanca, Spain
[6] Hosp Univ Salamanca, Serv Pediat, Salamanca, Spain
[7] Complejo Asistencial Univ Salamanca, Serv Alergia, Salamanca, Spain
关键词
Asthma; Genome-wide association studies (GWAS); Genomics; Next generation sequencing; Epigenetics; CHILDHOOD ASTHMA; VARIANTS; CHILDREN; GENES;
D O I
10.1016/j.aller.2014.07.004
中图分类号
R392 [医学免疫学];
学科分类号
100102 ;
摘要
Asthma is a complex disease determined by the interaction of different genes and environmental factors. The first genetic investigations in asthma were candidate gene association studies and linkage studies. In recent years research has focused on association studies that scan the entire genome without any prior conditioning hypothesis: the so-called genome-wide association studies (GWAS). The first GWAS was published in 2007, and described a new locus associated to asthma in chromosome 17q12-q21, involving the ORMDL3, GSDMB and ZPBP2 genes (a description of the genes named in the manuscript are listed in Table 1). None of these genes would have been selected in a classical genetic association study since it was not known they could be implicated in asthma. To date, a number of GWAS studies in asthma have been made, with the identification of about 1000 candidate genes. Coordination of the different research groups in international consortiums and the application of new technologies such as new generation sequencing will help discover new implicated genes and improve our understanding of the molecular mechanisms underlying the disease. (C) 2014 SEICAP. Published by Elsevier Espana, S.L.U. All rights reserved.
引用
收藏
页码:601 / 608
页数:8
相关论文
共 50 条
  • [21] Hits and defeats of genome-wide association studies of atopy and asthma
    Danielewicz, Hanna
    [J]. JOURNAL OF APPLIED BIOMEDICINE, 2017, 15 (03) : 161 - 168
  • [22] Findings in genome-wide association studies on asthma lack generalisation
    Zhang, Guicheng
    Goldblatt, Jack
    LeSouef, Peter
    [J]. CLINICAL RESPIRATORY JOURNAL, 2010, 4 (04): : e8 - e9
  • [23] Challenges with X chromosome analyses and reporting in Genome-Wide Association Studies (GWAS)
    Wang, Zhong
    Sun, Lei
    Paterson, Andrew D.
    [J]. GENETIC EPIDEMIOLOGY, 2021, 45 (07) : 798 - 798
  • [24] GWAS Central: a comprehensive resource for the comparison and interrogation of genome-wide association studies
    Beck, Tim
    Hastings, Robert K.
    Gollapudi, Sirisha
    Free, Robert C.
    Brookes, Anthony J.
    [J]. EUROPEAN JOURNAL OF HUMAN GENETICS, 2014, 22 (07) : 949 - 952
  • [25] Editorial: Statistical methods for genome-wide association studies (GWAS) and transcriptome-wide association studies (TWAS) and their applications
    Shao, Mengting
    Zhang, Zilong
    Sun, Huiyan
    He, Jingni
    Wang, Juexin
    Zhang, Qingrun
    Cao, Chen
    [J]. FRONTIERS IN GENETICS, 2023, 14
  • [26] Genome-wide association studies in asthma; perhaps, the end of the beginning
    Lockett, Gabrielle A.
    Holloway, John W.
    [J]. CURRENT OPINION IN ALLERGY AND CLINICAL IMMUNOLOGY, 2013, 13 (05) : 463 - 469
  • [27] Genome-wide association studies for discovery of genes involved in asthma
    Akhabir, Loubna
    Sandford, Andrew J.
    [J]. RESPIROLOGY, 2011, 16 (03) : 396 - 406
  • [28] GWAS Central: a comprehensive resource for the comparison and interrogation of genome-wide association studies
    Tim Beck
    Robert K Hastings
    Sirisha Gollapudi
    Robert C Free
    Anthony J Brookes
    [J]. European Journal of Human Genetics, 2014, 22 : 949 - 952
  • [29] Contributions of candidate-gene associations studies and genome-wide association studies (GWAS) to identification of genetic variations associated with asthma
    Friedrich, Frederico
    de Castro, Miguel Angelo Uflacker Lutz
    Herter, Eduardo da Costa
    Prestes, Laura Menestrino
    Pinto, Leonardo Araujo
    [J]. ANNALS OF TRANSLATIONAL MEDICINE, 2022,
  • [30] A Genome-Wide Association Study (GWAS) for Bronchopulmonary Dysplasia
    Wang, Hui
    St Julien, Krystal R.
    Stevenson, David K.
    Hoffmann, Thomas J.
    Witte, John S.
    Lazzeroni, Laura C.
    Krasnow, Mark A.
    Quaintance, Cecele C.
    Oehlert, John W.
    Jelliffe-Pawlowski, Laura L.
    Gould, Jeffrey B.
    Shaw, Gary M.
    O'Brodovich, Hugh M.
    [J]. PEDIATRICS, 2013, 132 (02) : 290 - 297