Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of glyceraldehyde-3-phosphate dehydrogenase from Streptococcus agalactiae NEM316

被引:3
|
作者
Nagarajan, Revathi [1 ]
Ponnuraj, Karthe [1 ]
机构
[1] Univ Madras, Ctr Adv Study Crystallog & Biophys, Madras 600025, Tamil Nadu, India
关键词
GROUP-B STREPTOCOCCI; HOLO-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE; CRYSTAL-STRUCTURE; PROTEIN; RESISTANCE; BINDING; GAPDH;
D O I
10.1107/S2053230X14011418
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) is an essential enzyme involved in glycolysis. Despite lacking the secretory signal sequence, this cytosolic enzyme has been found localized at the surface of several bacteria and fungi. As a surface protein, GAPDH exhibits various adhesive functions, thereby facilitating colonization and invasion of host tissues. Streptococcus agalactiae, also known as group B streptococcus (GBS), binds onto the host using its surface adhesins and causes sepsis and pneumonia in neonates. GAPDH is one of the surface adhesins of GBS binding to human plasminogen and is a virulent factor associated with host colonization. Although the surface-associated GAPDH has been shown to bind to a variety of host extracellular matrix (ECM) molecules in various bacteria, the molecular mechanism underlying their interaction is not fully understood. To investigate this, structural studies on GAPDH of S. agalactiae were initiated. The gapC gene of S. agalactiae NEM316 encoding GAPDH protein was cloned into pET-28a vector, overexpressed in Escherichia coli BL21(DE3) cells and purified to homogeneity. The purified protein was crystallized using the hanging-drop vapour-diffusion method. The GAPDH crystals obtained in two different crystallization conditions diffracted to 2.8 and 2.6 angstrom resolution, belonging to two different space groups P2(1) and P2(1)2(1)2(1), respectively. The structure was solved by molecular replacement and structure refinement is now in progress.
引用
收藏
页码:938 / 941
页数:4
相关论文
共 50 条
  • [21] Crystallization and preliminary X-ray diffraction studies of D-glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic archaeon Methanothermus fervidus
    Charron, C
    Talfournier, F
    Isupov, MN
    Branlant, G
    Littlechild, JA
    Vitoux, B
    Aubry, A
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1999, 55 : 1353 - 1355
  • [22] Cloning and purification of the Streptococcus suis serotype 2 glyceraldehyde-3-phosphate dehydrogenase and its involvement as an adhesin
    Brassard, J
    Gottschalk, M
    Quessy, S
    [J]. VETERINARY MICROBIOLOGY, 2004, 102 (1-2) : 87 - 94
  • [23] Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of the mitochondrial tryparedoxin peroxidase from Leishmania braziliensis
    Bueno de Morais, Mariana Abrahao
    Campos Brasil de Souza, Tatiana de Arruda
    Murakami, Mario Tyago
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2013, 69 : 408 - 411
  • [24] Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of propionate kinase (TdcD) from Salmonella typhimurium
    Simanshu, DK
    Murthy, MRN
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2005, 61 : 52 - 55
  • [25] Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of variants of monoamine oxidase from Aspergillus niger
    Atkin, Kate E.
    Reiss, Renate
    Turner, Nicholas J.
    Brzozowski, Andrzej M.
    Grogan, Gideon
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2008, 64 : 182 - 185
  • [26] Involvement of glyceraldehyde-3-phosphate dehydrogenase in the X-ray resistance of HeLa cells
    Lu, Jun
    Suzuki, Toshikazu
    Lu, Sa
    Suzuki, Nobuo
    [J]. BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY, 2008, 72 (09) : 2432 - 2435
  • [27] Purification, crystallization and preliminary X-ray analysis of apo glyceraldehyde-3-phosphate dehydrogenase 1 (GAP1) from methicillin-resistant Staphylococcus aureus (MRSA252)
    Mukherjee, Somnath
    Saha, Baisakhee
    Dutta, Debajyoti
    Das, Amit Kumar
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2010, 66 : 506 - 508
  • [28] Cloning and analysis of glyceraldehyde-3-phosphate dehydrogenase gene from Cordyceps militaris
    Gong, Zhenhua
    Su, Ying
    Huang, Lei
    Lin, Juan
    Tang, Kexuan
    Zhou, Xuanwei
    [J]. AFRICAN JOURNAL OF AGRICULTURAL RESEARCH, 2009, 4 (04): : 402 - 408
  • [29] Cloning, expression, purification, crystallization and preliminary X-ray analysis of the pilus-associated sortase C from Streptococcus pneumoniae
    Neiers, F.
    Madhurantakam, C.
    Falker, S.
    Normark, S.
    Henriques-Normark, B.
    Achour, A.
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2009, 65 : 55 - 58
  • [30] GPX3 from Arabidopsis thaliana: cloning, expression, purification, crystallization and preliminary X-ray analysis
    Li, Kun
    Yang, Qingzhan
    Wang, Wei
    Zhao, Xiaoliang
    Lou, Zhiyong
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2013, 69 : 1224 - 1226