Expanding Avenue of Fast Neutron Mediated Mutagenesis for Crop Improvement

被引:33
|
作者
Kumawat, Surbhi [1 ]
Rana, Nitika [1 ]
Bansal, Ruchi [1 ]
Vishwakarma, Gautam [2 ]
Mehetre, Sayaji T. [2 ]
Das, Bikram Kishore [2 ]
Kumar, Manish [3 ]
Yadav, Satish Kumar [4 ]
Sonah, Humira [1 ]
Sharma, Tilak Raj [1 ]
Deshmukh, Rupesh [1 ]
机构
[1] NABI, Mohali 140308, Punjab, India
[2] Bhabha Atom Res Ctr, Nucl Agr & Biotechnol Div, Mumbai 400085, Maharashtra, India
[3] Dr Yashwant Singh Parmar Univ Hort & Forestry, Dept Seed Sci & Technol, Coll Hort, Solan 173230, Himachal Prades, India
[4] Natl Bur Plant Genet Resources, New Delhi 110012, India
来源
PLANTS-BASEL | 2019年 / 8卷 / 06期
关键词
induced mutagenesis; fast neutron irradiation; mutation mapping; deletagene; next-generation sequencing technologies; reverse genetics; RELATIVE BIOLOGICAL EFFECTIVENESS; INSERTIONAL MUTAGENESIS; REVERSE GENETICS; GAMMA-RAYS; MAMMALIAN-CELLS; INDUCED MUTANTS; DNA-DAMAGE; X-RAYS; IRRADIATION; MUTATION;
D O I
10.3390/plants8060164
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
Fast neutron (FN) radiation mediated mutagenesis is a unique approach among the several induced mutagenesis methods being used in plant science in terms of impacted mutations. The FN mutagenesis usually creates deletions from few bases to several million bases (Mb). A library of random deletion generated using FN mutagenesis lines can provide indispensable resources for the reverse genetic approaches. In this review, information from several efforts made using FN mutagenesis has been compiled to understand the type of induced mutations, frequency, and genetic stability. Concerns regarding the utilization of FN mutagenesis technique for a plant with different level of ploidy and genome complexity are discussed. We have highlighted the utility of next-generation sequencing techniques that can be efficiently utilized for the characterization of mutant lines as well as for the mapping of causal mutations. Pros and cons of mapping by mutation (MutMap), mutant chromosome sequencing (MutChromSeq), exon capture, whole genome sequencing, MutRen-Seq, and different tilling approaches that can be used for the detection of FN-induced mutation has also been discussed. Genomic resources developed using the FN mutagenesis have been catalogued wooing to meaningful utilization of the available resources. The information provided here will be helpful for the efficient exploration for the crop improvement programs and for better understanding of genetic regulations.
引用
收藏
页数:16
相关论文
共 50 条
  • [21] IMPROVEMENT OF THE EQUIPMENT IN FAST-NEUTRON REACTOR FACILITIES
    Vasiliev, B. A.
    Kamanin, Yu. L.
    Gladkov, V. V.
    Bartenev, V. N.
    Shepelev, S. F.
    Kuzavkov, N. G.
    Denisov, V. V.
    Karsonov, V. I.
    ATOMIC ENERGY, 2010, 108 (04) : 303 - 309
  • [22] Improvement of the equipment in fast-neutron reactor facilities
    B. A. Vasiliev
    Yu. L. Kamanin
    V. V. Gladkov
    V. N. Bartenev
    S. F. Shepelev
    N. G. Kuzavkov
    V. V. Denisov
    V. I. Karsonov
    Atomic Energy, 2010, 108 : 303 - 309
  • [23] A fast neutron deletion mutagenesis-based reverse genetics system for plants
    Li, X
    Song, YJ
    Century, K
    Straight, S
    Ronald, P
    Dong, XN
    Lassner, M
    Zhang, YL
    PLANT JOURNAL, 2001, 27 (03): : 235 - 242
  • [24] Nodulation deficiency caused by fast neutron mutagenesis of the model legume Lotus japonicus
    Hoffmann, Dana
    Jiang, Qunyi
    Men, Artem
    Kinkema, Mark
    Gresshoff, Peter M.
    JOURNAL OF PLANT PHYSIOLOGY, 2007, 164 (04) : 460 - 469
  • [25] Fast neutron mutagenesis in soybean enriches for small indels and creates frameshift mutations
    Wyant, Skylar R.
    Rodriguez, M. Fernanda
    Carter, Corey K.
    Parrott, Wayne A.
    Jackson, Scott A.
    Stupar, Robert M.
    Morrell, Peter L.
    G3-GENES GENOMES GENETICS, 2022, 12 (02):
  • [26] Gain-of-function mutagenesis approaches in rice for functional genomics and improvement of crop productivity
    Moin, Mazahar
    Bakshi, Achala
    Saha, Anusree
    Dutta, Mouboni
    Kirti, P. B.
    BRIEFINGS IN FUNCTIONAL GENOMICS, 2017, 16 (04) : 238 - 247
  • [27] Moving On Up: H+-PPase Mediated Crop Improvement
    Gaxiola, Roberto A.
    Regmi, Kamesh
    Hirschi, Kendal D.
    TRENDS IN BIOTECHNOLOGY, 2016, 34 (05) : 347 - 349
  • [28] Fungal Endophyte-Mediated Crop Improvement: The Way Ahead
    Chitnis, Vijaya R.
    Suryanarayanan, Trichur S.
    Nataraja, Karaba N.
    Prasad, S. Rajendra
    Oelmueller, Ralf
    Shaanker, R. Uma
    FRONTIERS IN PLANT SCIENCE, 2020, 11
  • [29] Application of CRISPR-Mediated Gene Editing for Crop Improvement
    Chandranandani Negi
    Neeraj Kumar Vasistha
    Dharmendra Singh
    Pritesh Vyas
    H. S. Dhaliwal
    Molecular Biotechnology, 2022, 64 : 1198 - 1217
  • [30] Application of CRISPR-Mediated Gene Editing for Crop Improvement
    Negi, Chandranandani
    Vasistha, Neeraj Kumar
    Singh, Dharmendra
    Vyas, Pritesh
    Dhaliwal, H. S.
    MOLECULAR BIOTECHNOLOGY, 2022, 64 (11) : 1198 - 1217