Cytochrome P450CAM enzymatic catalysis cycle: A quantum mechanics molecular mechanics study

被引:118
|
作者
Guallar, V
Friesner, RA [1 ]
机构
[1] Columbia Univ, Dept Chem, New York, NY 10027 USA
[2] Columbia Univ, Ctr Biomol Simulat, New York, NY 10027 USA
关键词
D O I
10.1021/ja036123b
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
The catalytic pathway of cytochrome P450cam is studied by means of a hybrid quantum mechanics/molecular mechanics method. Our results reveal an active role of the enzyme in the different catalytic steps. The protein initially controls the energy gap between the high- and low-spin states in the substrate binding process, allowing thermodynamic reduction by putidaredoxin reductase and molecular oxygen addition. A second electron reduction activates the delivery of protons to the active site through a selective interaction of Thr252 and the distal oxygen causing the O-O cleavage. Finally, the protein environment catalyzes the substrate hydrogen atom abstraction step with a remarkably low free energy barrier (similar to8 kcal/mol). Our results are consistent with the effect of mutations on the enzymatic efficacy and provide a satisfactory explanation for the experimental failure to trap the proposed catalytically competent species, a ferryl Fe(IV) heme.
引用
收藏
页码:8501 / 8508
页数:8
相关论文
共 50 条
  • [21] A functional proline switch in cytochrome P450cam
    OuYang, Bo
    Pochapsky, Susan Sondej
    Dang, Marina
    Pochapsky, Thomas C.
    STRUCTURE, 2008, 16 (06) : 916 - 923
  • [22] Putidaredoxin-cytochrome P450cam interaction
    Shimada, H
    Nagano, S
    Hori, H
    Ishimura, Y
    JOURNAL OF INORGANIC BIOCHEMISTRY, 2001, 83 (04) : 255 - 260
  • [23] SINGLE-CRYSTAL EPR STUDY OF CYTOCHROME P450CAM
    DEVANEY, P
    WAGNER, GC
    DEBRUNNER, PG
    BULLETIN OF THE AMERICAN PHYSICAL SOCIETY, 1979, 24 (03): : 319 - 319
  • [24] THE PRIMARY STRUCTURE OF THE MONOXYGENASE CYTOCHROME P450CAM
    HANIU, M
    ARMES, LG
    TANAKA, M
    YASUNOBU, KT
    SHASTRY, BS
    WAGNER, GC
    GUNSALUS, IC
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 1982, 105 (03) : 889 - 894
  • [25] The oxidation of naphthalene and pyrene by cytochrome P450cam
    England, PA
    Harford-Cross, CF
    Stevenson, JA
    Rouch, DA
    Wong, LL
    FEBS LETTERS, 1998, 424 (03): : 271 - 274
  • [26] Conformational Landscape and the Selectivity of Cytochrome P450cam
    Basom, Edward J.
    Spearman, James W.
    Thielges, Megan C.
    JOURNAL OF PHYSICAL CHEMISTRY B, 2015, 119 (22): : 6620 - 6627
  • [27] Engineering molecular recognition in alkane oxidation catalysed by cytochrome P450cam
    Stevenson, JA
    Bearpark, JK
    Wong, LL
    NEW JOURNAL OF CHEMISTRY, 1998, 22 (06) : 551 - 552
  • [28] Conformational Heterogeneity and the Affinity of Substrate Molecular Recognition by Cytochrome P450cam
    Basom, Edward J.
    Manifold, Bryce A.
    Thielges, Megan C.
    BIOCHEMISTRY, 2017, 56 (25) : 3248 - 3256
  • [29] Quantum and molecular mechanical study of the first proton transfer in the catalytic cycle of cytochrome p450cam and its mutant D251N
    Wang, Dongqi
    Zheng, Jingjing
    Shaik, Sason
    Thiel, Walter
    JOURNAL OF PHYSICAL CHEMISTRY B, 2008, 112 (16): : 5126 - 5138
  • [30] Engineering cytochrome P450cam into an alkane hydroxylase
    Bell, SG
    Orton, E
    Boyd, H
    Stevenson, JA
    Riddle, A
    Campbell, S
    Wong, LL
    DALTON TRANSACTIONS, 2003, (11) : 2133 - 2140