A genetic map of an interspecific cross in Allium based on amplified fragment length polymorphism (AFLP™) markers

被引:100
|
作者
van Heusden, AW [1 ]
van Ooijen, JW [1 ]
Vrielink-van Ginkel, R [1 ]
Verbeek, WHJ [1 ]
Wietsma, WA [1 ]
Kik, C [1 ]
机构
[1] DLO, Ctr Plant Breeding & Reprod Res, CPRO, NL-6700 AA Wageningen, Netherlands
关键词
AFLP; Allium roylei; Allium cepa; downy mildew; genetic linkage map; onion;
D O I
10.1007/s001220050017
中图分类号
S3 [农学(农艺学)];
学科分类号
0901 ;
摘要
Segregation of 692 polymorphic AFLP(TM) (amplified fragment length polymorphism) fragments was determined in an F-2 Of the interspecific cross A. roylei x A. cepa. Two different enzyme combinations were used, PstI/MseI and EcoRI/MseI; in the latter one extra selective nucleotide was added to the MseI primer. The map based on A. cepa markers consisted of eight linkage groups with 262 markers covering 694 cM of the expected 800 cM. The map based on A. roylei markers comprised 15 linkage groups with 243 markers and had a length of 626 cM. The two maps were not integrated, and 25% of the markers remained unlinked. One of the alliinase genes and a SCAR marker linked to the disease resistance gene to downy mildew are present on this map. Of the AFLP markers, 50-80% were polymorphic between A. cepa and A. roylei; the level of polymorphic markers between different A. cepa accessions was 4-8%.
引用
收藏
页码:118 / 126
页数:9
相关论文
共 50 条
  • [31] Accurate gene diversity estimates from amplified fragment length polymorphism (AFLP) markers
    Krauss, SL
    [J]. MOLECULAR ECOLOGY, 2000, 9 (09) : 1241 - 1245
  • [32] Genetic diversity of Echinacea species based upon amplified fragment length polymorphism markers
    Kim, DH
    Heber, D
    Still, DW
    [J]. GENOME, 2004, 47 (01) : 102 - 111
  • [33] An amplified fragment length polymorphism map of the silkworm
    Tan, YD
    Wan, CL
    Zhu, YF
    Lu, C
    Xiang, ZH
    Deng, HW
    [J]. GENETICS, 2001, 157 (03) : 1277 - 1284
  • [34] Genotyping and genetic diversity of Arcobacter butzleri by amplified fragment length polymorphism (AFLP) analysis
    On, SLW
    Atabay, HI
    Amisu, KO
    Coker, AO
    Harrington, CS
    [J]. LETTERS IN APPLIED MICROBIOLOGY, 2004, 39 (04) : 347 - 352
  • [35] Genetic Variation and Phylogeny of Wabisuke Camellias by Amplified Fragment Length Polymorphism (AFLP) Analysis
    Kim, Jung-Hee
    Koike, Itsumi
    Nakashima, Toshiki
    Hiramatsu, Michikazu
    Miyajima, Ikuo
    Mizunoe, Yuki
    Okubo, Hiroshi
    Ozaki, Yukio
    [J]. AGRONOMY-BASEL, 2021, 11 (10):
  • [36] Genetic diversity of Aegiceras corniculatum (Myrsinaceae) revealed by amplified fragment length polymorphism (AFLP)
    Deng, Shulin
    Huang, Yelin
    He, Hanghang
    Tan, Fengxiao
    Ni, Xiaowei
    Jayatissa, L. P.
    Hettiarachi, Sanath
    Sh, Suhua
    [J]. AQUATIC BOTANY, 2009, 90 (04) : 275 - 281
  • [37] Amplified fragment length polymorphism (AFLP)-based differentiation of selected Chara species
    Urbaniak, Jacek
    Combik, Michal
    [J]. OCEANOLOGICAL AND HYDROBIOLOGICAL STUDIES, 2017, 46 (01) : 74 - 84
  • [38] Amplified fragment length polymorphism (AFLP) analysis of Listeria monocytogenes
    Guerra, MM
    Bernardo, F
    McLauchlin, J
    [J]. SYSTEMATIC AND APPLIED MICROBIOLOGY, 2002, 25 (03) : 456 - 461
  • [39] Amplified fragment length polymorphism (AFLP) analysis of Listeria monocytogenes
    Ripabelli, G
    McLauchlin, J
    Threlfall, EJ
    [J]. SYSTEMATIC AND APPLIED MICROBIOLOGY, 2000, 23 (01) : 132 - 136
  • [40] AFLP (amplified fragment length polymorphism) and its application in aquaculture
    Montano-Perez, Karla
    Villalpando-Canchola, Enrique
    Vargas-Albores, Francisco
    [J]. INTERCIENCIA, 2006, 31 (08) : 563 - 569