Complete genomic DNA sequence of rock bream iridovirus

被引:124
|
作者
Do, JW
Moon, CH
Kim, HJ
Ko, MS
Kim, SB
Son, JH
Kim, JS
An, EJ
Kim, MK
Lee, SK
Han, MS
Cha, SJ
Park, MS
Park, MA
Kim, YC
Kim, JW
Park, JW [1 ]
机构
[1] Univ Ulsan, Dept Biol Sci, Ulsan 680749, South Korea
[2] Natl Fisheries Res & Dev Inst, Div Pathol, Pusan 626900, South Korea
基金
新加坡国家研究基金会;
关键词
RBIV; iridovirus; genome;
D O I
10.1016/j.virol.2004.05.008
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Iridovirus is a causative agent of epizootics among cultured rock bream (Oplegnathus fasciatus) in Korea. Here, we report the complete genomic sequence of rock bream iridovirus (RBIV). The genome of RBIV was 112080 bp long and contained at least 118 putative open reading frames (ORFs), and its genome organization was similar to that of infectious spleen and kidney necrosis virus (ISKNV). Of the RBIV's 118 ORFs, 85 ORFs showed 60-99% amino acid identity to those of ISKNV Phylogenetic analysis of major capsid protein (MCP), DNA repair protein RAD2, and DNA polyinerase type-B family indicated that RBIV is closely related to red sea bream iridovirus (RSIV), Grouper sleepy disease iridovirus (GSDIV), Dwarf gourami iridovirus (DGIV), and ISKNV. The genome sequence provides useful information concerning the evolution and divergence of iridoviruses in cultured fish. (C) 2004 Elsevier Inc. All tights reserved.
引用
收藏
页码:351 / 363
页数:13
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