Bacillus bingmayongensis sp nov., isolated from the pit soil of Emperor Qin's Terra-cotta warriors in China

被引:47
|
作者
Liu, Bo [1 ]
Liu, Guo-Hong [1 ]
Hu, Gui-Ping [1 ,2 ]
Cetin, Sengonca [3 ]
Lin, Nai-Quan [2 ]
Tang, Jian-Yang [1 ]
Tang, Wei-Qi [2 ]
Lin, Ying-Zhi [1 ]
机构
[1] Fujian Acad Agr Sci, Agr Bioresource Inst, Fuzhou 350003, Fujian, Peoples R China
[2] Fujian Agr & Forest Univ, Fuzhou 350002, Fujian, Peoples R China
[3] Univ Bonn, Inst Nutzpflanzenwissensch & Ressourcenschutz INR, D-53115 Bonn, Germany
关键词
Bacillus bingmayongensis; Emperor Qin's Terra-cotta Warriors; Polyphasic taxonomy; Average nucleotide identity; 16S RIBOSOMAL-RNA; DNA-DNA HYBRIDIZATION; SPECIES DEFINITION; GENOME SEQUENCE; GYRB GENES; COMB; NOV; CEREUS; PHYLOGENIES; SHEWANELLA; TAXONOMY;
D O I
10.1007/s10482-013-0102-3
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Bacillus-like isolate, strain FJAT-13831(T), isolated from the No. 1 pit soil of Emperor Qin's Terra-cotta Warriors in Xi'an City, China, was studied to determine its taxonomic status. Dominant fatty acids of this organism included iso-C-15:0, iso-C-17:0, C-16:0, iso-C-13:0, anteiso-C-15:0, and iso-C-17:1 omega 5c. Comparative 16S rRNA gene sequence analysis confirmed the affiliation of this isolate to the genus Bacillus and indicated that it was closely related to Bacillus pseudomycoides DSM 12442(T) (99.72 % similarity). A phylogenetic analysis of the gyrB gene sequence similarities exhibited independent clustering of the isolate FJAT-13831(T) and showed 93.8 % (< 95 %) sequence similarity with its closest phylogenetic neighbour B. pseudomycoides DSM 12442(T). Separate standing of the strain FJAT-13831(T) was supported by a whole genome-based phylogenetic analysis with an average nucleotide identity value of 91.47 (< 95 %) between isolate FJAT-13831(T) and B. pseudomycoides DSM 12442(T) and was consistent with the results of DNA-DNA hybridization (69.1 % relatedness). These findings support the conclusion that the isolate FJAT-13831(T) represents a novel species, for which the name Bacillus bingmayongensis sp. nov. is proposed. The type strain is FJAT-13831(T) (= CGMCC 1.12043(T) = DSM 25427(T)).
引用
收藏
页码:501 / 510
页数:10
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