Complementary packing of α-helices in proteins

被引:31
|
作者
Efimov, AV [1 ]
机构
[1] Russian Acad Sci, Inst Prot Res, Pushchino 142292, Moscow Region, Russia
关键词
complementarity; helix packing; hydrophobic stripe; packing angle; protein structure;
D O I
10.1016/S0014-5793(99)01507-0
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The packing of alpha-helices in proteins is restricted by both the principle of close packing and the chemical nature of side chains. As a result, (1) a-helical surfaces forming the interface should be complementary to each other, (2) hydrophobic stripes of the alpha-helices should fit together like pieces of a jigsaw puzzle, and (3) buried polar side chains (if there are any) should be arranged in a complementary fashion, (C) 1999 Federation of European Biochemical Societies.
引用
下载
收藏
页码:3 / 6
页数:4
相关论文
共 50 条
  • [31] Packing in the Proteins
    Massaquoi, Michelle S.
    Guillemin, Karen
    DEVELOPMENTAL CELL, 2019, 51 (01) : 1 - 2
  • [32] Note on the construction of glass helices for fractionating column packing
    Roper, EE
    Wright, GF
    Ruhoff, JR
    Smith, WR
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1935, 57 (01) : 954 - 955
  • [33] PACKING POLYMORPHISM OF ALPHA-HELICES IN A SYNTHETIC POLYPEPTIDE
    SASAKI, S
    POLYMER, 1986, 27 (06) : 849 - 855
  • [34] Method to assess packing quality of transmembrane α-helices in proteins.: 2.: Validation by "correct vs misleading" test
    Chugunov, Anton O.
    Novoseletsky, Valery N.
    Nolde, Dmitry E.
    Arseniev, Alexander S.
    Efremov, Roman G.
    JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2007, 47 (03) : 1163 - 1170
  • [35] ANALYSIS AND PREDICTION OF THE PACKING OF ALPHA-HELICES AGAINST A BETA-SHEET IN THE TERTIARY STRUCTURE OF GLOBULAR-PROTEINS
    COHEN, FE
    STERNBERG, MJE
    TAYLOR, WR
    JOURNAL OF MOLECULAR BIOLOGY, 1982, 156 (04) : 821 - 862
  • [36] Dissecting α-helices:: Position-specific analysis of α-helices in globular proteins
    Kumar, S
    Bansal, M
    PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1998, 31 (04): : 460 - 476
  • [37] CORRELATION OF TM, SEQUENCE, AND DELTA-H OF COMPLEMENTARY RNA HELICES AND COMPARISON WITH DNA HELICES
    ORNSTEIN, RL
    FRESCO, JR
    BIOPOLYMERS, 1983, 22 (08) : 2001 - 2016
  • [38] Minimal complementary hydrogen-bonded double helices
    Wang, Hong-Bo
    Mudraboyina, Bhanu P.
    Li, Jiaxin
    Wisner, James A.
    CHEMICAL COMMUNICATIONS, 2010, 46 (39) : 7343 - 7345
  • [39] Pelvic packing or angiography: Competitive or complementary?
    Suzuki, Takashi
    Smith, Wade R.
    Moore, Ernest E.
    INJURY-INTERNATIONAL JOURNAL OF THE CARE OF THE INJURED, 2009, 40 (04): : 343 - 353
  • [40] THE PACKING OF ALPHA-HELICES - SIMPLE COILED-COILS
    CRICK, FHC
    ACTA CRYSTALLOGRAPHICA, 1953, 6 (8-9): : 689 - 697