Tautomery and H-bonding characteristics of 2-aminopurine: a combined experimental and theoretical study

被引:23
|
作者
Ramaekers, R
Adamowicz, L
Maes, G
机构
[1] Univ Louvain, Dept Chem, B-3001 Heverlee, Belgium
[2] Univ Arizona, Dept Chem, Tucson, AZ 85721 USA
来源
EUROPEAN PHYSICAL JOURNAL D | 2002年 / 20卷 / 03期
关键词
D O I
10.1140/epjd/e2002-00160-9
中图分类号
O43 [光学];
学科分类号
070207 ; 0803 ;
摘要
An experimental and theoretical RHF, MP2 and DFT/6-31++G** study is described of the matrix FT-IR spectra of monomer 2-aminopurine and H-bonded complexes of 2-aminopurine with water. 2-aminopurine occurs in Ar predominantly as the amino-N9H tautomer, but small amounts of the amino-N7H tautomer are also present. An approximate K-T value for this tautomeric equilibrium is found to be 0.016 (RHF) and 0.015 (DFT) using the infrared intensity measurement. Four H-bonded complexes of the abundant amino-N9H form with water are detected in the experimental FT-IR spectrum by their characteristic predicted absorptions, i.e. the three closed complexes N3(...)H-(OH)-H-...-N9, N1(...)H-(OH)-H-...-NH, N3(...)H-(OH)-H-...-NH and the open complex N7(...)H-OH. From the experimental results, the proton,affinity of the N7 atom in 2-aminopurine can be estimated. The dependence of the H-bond strength on the H-bond linearity is demonstrated by a correlation between the (NH)-H-... distance and the (NH)-H-...-O angle in closed (NH)-H-...-(OH)-H-...-N complexes.
引用
收藏
页码:375 / 388
页数:14
相关论文
共 50 条
  • [11] Theoretical Investigation of the Intramolecular H-Bonding on Tautomerism
    Lafifi, I.
    Khatmi, D.
    PROCEEDINGS OF MEST 2012: ELECTRONIC STRUCTURE METHODS WITH APPLICATIONS TO EXPERIMENTAL CHEMISTRY, 2014, 68 : 257 - 268
  • [12] Solvent effects on the excited state properties of 2-aminopurine - a theoretical study by the ONIOM and supramolecular method
    Zhang, RB
    Ai, XC
    Zhang, XK
    Zhang, QY
    JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2004, 680 (1-3): : 21 - 27
  • [13] Experimental observations of H-bonding symmetrization of δ-AIOOH
    Kagi, H.
    Ushijima, D.
    Sano-Furukawa, A.
    Komatsu, K.
    Iizuka, R.
    Nagai, T.
    Nakano, S.
    GEOCHIMICA ET COSMOCHIMICA ACTA, 2009, 73 (13) : A613 - A613
  • [14] Theoretical studies of the effects of intramolecular interactions on the excited stateelectronic properties of 2-aminopurine
    Jean, JM
    Hall, KB
    BIOPHYSICAL JOURNAL, 2000, 78 (01) : 252A - 252A
  • [15] Influence of base stacking and hydrogen bonding on the fluorescence of 2-aminopurine and pyrrolocytosine in nucleic acids
    Hardman, Samantha J. O.
    Thompson, Katherine C.
    BIOCHEMISTRY, 2006, 45 (30) : 9145 - 9155
  • [16] Theoretical study of the photophysics of adenine in solution: Tautomerism, deactivation mechanisms, and comparison with the 2-aminopurine fluorescent isomer
    Mennucci, B
    Toniolo, A
    Tomasi, J
    JOURNAL OF PHYSICAL CHEMISTRY A, 2001, 105 (19): : 4749 - 4757
  • [17] NMR study of the conformation of the 2-aminopurine:cytosine mismatch in DNA
    Fagan, PA
    Fabrega, C
    Eritja, R
    Goodman, MF
    Wemmer, DE
    BIOCHEMISTRY, 1996, 35 (13) : 4026 - 4033
  • [18] IR Vibrational spectra of H-bonded complexes of adenine, 2-aminopurine and 2-aminopurine+ with cytosine and thymine: Quantum-chemical study
    O. O. Brovarets’
    D. M. Hovorun
    Optics and Spectroscopy, 2011, 111 : 750 - 757
  • [19] What is a hydrogen bond? Mutually consistent theoretical and experimental criteria for characterizing H-bonding interactions
    Weinhold, Frank
    Klein, Roger A.
    MOLECULAR PHYSICS, 2012, 110 (9-10) : 565 - 579