Bacterial taxa associated with the hematophagous mite Dermanyssus gallinae detected by 16S rRNA PCR amplification and TTGE fingerprinting

被引:41
|
作者
Moro, Claire Valiente [1 ,6 ]
Thioulouse, Jean [2 ,3 ,4 ]
Chauve, Claude [1 ]
Normand, Philippe [2 ,3 ,5 ]
Zenner, Lionel [1 ,2 ,3 ,4 ]
机构
[1] ENVL, INRA, UMR 958, Marcy Letoile, France
[2] Univ Lyon 1, F-69622 Villeurbanne, France
[3] Univ Lyon, CNRS, F-69622 Villeurbanne, France
[4] CNRS, UMR 5558, F-69622 Villeurbanne, France
[5] CNRS, UMR 5557, F-69622 Villeurbanne, France
[6] CNRS, UMR 6023, Lab Microorganismes Genome & Environm, Aubiere, France
关键词
Ectoparasite; Bacterial community; Symbionts; Molecular fingerprints; IXODES-SCAPULARIS; RED MITE; TICKS; TEMPERATURE; RESISTANCE; CARDINIUM; SYMBIONTS; ACARI; DGGE; DNA;
D O I
10.1016/j.resmic.2008.10.006
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Demanyssus gallinae (Arthropoda, Mesostigmata) is suspected to be involved in the transmission of a wide variety of pathogens, but nothing is known about its associated non-pathogenic bacterial community. To address this question, we examined the composition of bacterial communities in D. gallinae collected from standard poultry farms in Brittany, France. Genetic fingerprints of bacterial communities were generated by temporal temperature gradient gel electrophoresis (TTGE) separation of individual polymerase chain reaction (PCR)-amplified 16S rRNA gene fragments, followed by DNA sequence analysis. Most of the sequences belonged to the Proteobacteria and Firmicute phyla, with a majority of sequences corresponding to the Enterobacteriales order and the Staphylococcus genus. By using statistical analysis, we showed differences in biodiversity between poultry farms. We also determined the major phylotypes that compose the characteristic microbiota associated with D. gallinae. Saprophytes, opportunistic pathogens and pathogenic agents such as Pasteurella multocida, Erysipelothrix rhusiopathiae and sequences close to the genus Aerococcus were identified. Endosymbionts such as Schineria sp., Spiroplasma sp. Anistosticta, "Candidatus Cardinium hertigii" and Rickettsiella sp. were also present in the subdominant bacterial community. Identification of potential targets within the symbiont community may be considered in the future as a means of ectoparasite control. (C) 2008 Elsevier Masson SAS. All rights reserved.
引用
收藏
页码:63 / 70
页数:8
相关论文
共 50 条
  • [31] Enhancement of PCR amplification of actinobacterial 16S rRNA gene using an adjuvant, dimethyl sulphoxide
    Karuppiah, V.
    Aarthi, C.
    Sivakumar, K.
    CURRENT SCIENCE, 2011, 101 (01): : 22 - 23
  • [32] The PCR amplification of non-tuberculous mycobacterial 16S rRNA sequences from soil
    Mendum, TA
    Chilima, BZ
    Hirsch, PR
    FEMS MICROBIOLOGY LETTERS, 2000, 185 (02) : 189 - 192
  • [33] Detection of Verrucomicrobia in a pasture soil by PCR-mediated amplification of 16S rRNA genes
    O'Farrell, KA
    Janssen, PH
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1999, 65 (09) : 4280 - 4284
  • [34] Reducing the Effects of PCR Amplification and Sequencing Artifacts on 16S rRNA-Based Studies
    Schloss, Patrick D.
    Gevers, Dirk
    Westcott, Sarah L.
    PLOS ONE, 2011, 6 (12):
  • [35] Bacterial diversity of a Carolina bay as determined by 16S rRNA gene analysis: Confirmation of novel taxa
    Wise, MG
    McArthur, JV
    Shimkets, LJ
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1997, 63 (04) : 1505 - 1514
  • [36] Identification of bacterial species associated with the sheep scab mite (Psoroptes ovis) by using amplified genes coding for 16S rRNA
    Hogg, JC
    Lehane, MJ
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1999, 65 (09) : 4227 - 4229
  • [37] Spatial patterns of bacterial taxa in nature reflect ecological traits of deep branches of the 16S rRNA bacterial tree
    Philippot, Laurent
    Bru, David
    Saby, Nicolas P. A.
    Cuhel, Jiri
    Arrouays, Dominique
    Simek, Miloslav
    Hallin, Sara
    ENVIRONMENTAL MICROBIOLOGY, 2009, 11 (12) : 3096 - 3104
  • [38] Critical evaluation of two primers commonly used for amplification of bacterial 16S rRNA genes
    Frank, Jeremy A.
    Reich, Claudia I.
    Sharma, Shobha
    Weisbaum, Jon S.
    Wilson, Brenda A.
    Olsen, Gary J.
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2008, 74 (08) : 2461 - 2470
  • [39] Band smearing of PCR amplified bacterial 16S rRNA genes: Dependence on initial PCR target diversity
    Zrimec, Jan
    Kopinc, Rok
    Rijavec, Tomaz
    Zrimec, Tatjana
    Lapanje, Ales
    JOURNAL OF MICROBIOLOGICAL METHODS, 2013, 95 (02) : 186 - 194
  • [40] PCR of the 16S rRNA gene and DNA sequencing in establishing the aetiology of bacterial infections in children
    Gleesen, A.
    Grarup, C.
    INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS, 2007, 29 : S392 - S393