Adaptability and stability analyses of plants using random regression models

被引:7
|
作者
de Souza, Michel Henriques [1 ]
Pereira Junior, Jose Domingos [1 ]
Steckling, Skarlet De Marco [2 ]
Mencalha, Jussara [1 ]
Dias, Fabiola dos Santos [1 ]
Santos de Carvalho Rocha, Joao Romero do Amaral [2 ]
Souza Carneiro, Pedro Crescencio [2 ]
de Souza Carneiro, Jose Eustaquio [1 ]
机构
[1] Univ Fed Vicosa, Dept Agron, Vicosa, MG, Brazil
[2] Univ Fed Vicosa, Dept Biol Geral, Vicosa, MG, Brazil
来源
PLOS ONE | 2020年 / 15卷 / 12期
关键词
X ENVIRONMENT INTERACTION; REACTION NORM MODEL; SOMATIC-CELL SCORE; GENETIC DIVERSITY; PRODUCTION TRAITS; MIXED MODELS; SELECTION; GENOTYPE; PREDICTION; YIELD;
D O I
10.1371/journal.pone.0233200
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The evaluation of cultivars using multi-environment trials (MET) is an important step in plant breeding programs. One of the objectives of these evaluations is to understand the genotype by environment interaction (GEI). A method of determining the effect of GEI on the performance of cultivars is based on studies of adaptability and stability. Initial studies were based on linear regression; however, these methodologies have limitations, mainly in trials with genetic or statistical unbalanced, heterogeneity of residual variances, and genetic covariance. An alternative would be the use of random regression models (RRM), in which the behavior of the genotypes is characterized as a reaction norm using longitudinal data or repeated measurements and information regarding a covariance function. The objective of this work was the application of RRM in the study of the behavior of common bean cultivars using a MET, based on Legendre polynomials and genotype-ideotype distances. We used a set of 13 trials, which were classified as unfavorable or favorable environments. The results revealed that RRM enables the prediction of the genotypic values of cultivars in environments where they were not evaluated with high accuracy values, thereby circumventing the unbalanced of the experiments. From these values, it was possible to measure the genotypic adaptability according to ideotypes, according to their reaction norms. In addition, the stability of the cultivars can be interpreted as variation in the behavior of the ideotype. The use of ideotypes based on real data allowed a better comparison of the performance of cultivars across environments. The use of RRM in plant breeding is a good alternative to understand the behavior of cultivars in a MET, especially when we want to quantify the adaptability and stability of genotypes.
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页数:19
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