The PMDB Protein Model Database

被引:233
|
作者
Castrignano, Tiziana
De Meo, Paolo D'Onorio
Cozzetto, Domenico
Talamo, Ivano Giuseppe
Tramontano, Anna
机构
[1] Consorzio Interuniv Applicaz Supercalcolo Univ &, I-00185 Rome, Italy
[2] Univ Roma La Sapienza, Dept Biochem Sci, I-00185 Rome, Italy
[3] Univ Roma La Sapienza, Ist Pasteur, Fdn Canci Bolognetti, I-00185 Rome, Italy
关键词
D O I
10.1093/nar/gkj105
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The Protein Model Database (PMDB) is a public resource aimed at storing manually built 3D models of proteins. The database is designed to provide access to models published in the scientific literature, together with validating experimental data. It is a relational database and it currently contains > 74000 models for similar to 240 proteins. The system is accessible at http://www.caspur.it/PMDB and allows predictors to submit models along with related supporting evidence and users to download them through a simple and intuitive interface. Users can navigate in the database and retrieve models referring to the same target protein or to different regions of the same protein. Each model is assigned a unique identifier that allows interested users to directly access the data.
引用
收藏
页码:D306 / D309
页数:4
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