Interaction of hemin with quadruplex DNA

被引:24
|
作者
Nasab, Maryam Ghahremani [1 ]
Hassani, Leila [1 ]
Nejad, Sara Mohammadi [1 ]
Norouzi, Davood [2 ]
机构
[1] IASBS, Dept Biol Sci, Zanjan 451951159, Iran
[2] NCI, Cell Biol Lab, NIH, Bldg 37, Bethesda, MD 20892 USA
关键词
DNAzyme; Peroxidase; Quadruplex; Hemin; Interaction; CIRCULAR-DICHROISM; TELOMERASE ACTIVITY; BINDING; DNAZYMES; PORPHYRINS; COMPLEXES; AFFINITY;
D O I
10.1007/s10867-016-9430-7
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
A DNA enzyme with peroxidase activity is a G-quadruplex-based DNAzyme formed by hemin and G-quadruplex DNA. Activity of peroxide DNAzymes can be influenced by the structure of quadruplex DNA. In this investigation, the interaction of hemin with T30695 G-quadruplex DNA is evaluated. Molecular dynamic simulation indicates that the binding mode of hemin to G-quadruplex DNA is end-stacking, which is consistent with absorption spectroscopy. Based on fluorescence spectroscopy, hemin ejects thiazole orange from bases of four-strand DNA. Circular dichroism spectra showed that no alteration occurs in this type of DNA structure.
引用
收藏
页码:5 / 14
页数:10
相关论文
共 50 条
  • [1] Interaction of hemin with quadruplex DNA
    Maryam Ghahremani Nasab
    Leila Hassani
    Sara Mohammadi Nejad
    Davood Norouzi
    Journal of Biological Physics, 2017, 43 : 5 - 14
  • [2] Spectroscopic Studies on the Interaction of Hemin with Human Telomeric G-Quadruplex DNA
    Luo, Xu-Jian
    Qin, Qi-Pin
    Huang, Ke-Bin
    Liu, Yan-Cheng
    Liang, Hong
    ASIAN JOURNAL OF CHEMISTRY, 2013, 25 (11) : 6396 - 6400
  • [3] The Interaction of a Gemini Surfactant with a DNA Quadruplex
    Howard, Emily
    Little, Lindsay N.
    Boatwright, Emily A.
    Aguilar, Derek
    Nembaware, Hellen
    Ginegaw, Alexys
    Jordan, Alaina
    Justice, Payton
    Dominguez, Rafaela
    Muleta, Mekdelawit
    Bachofer, Steven
    Sheardy, Richard D.
    ACS OMEGA, 2024, 9 (28): : 30884 - 30890
  • [4] A G-Quadruplex/Hemin Complex with Switchable Peroxidase Activity by DNA Hybridization
    Shao Congying
    Lu Na
    Sun Dengming
    CHINESE JOURNAL OF CHEMISTRY, 2012, 30 (07) : 1575 - 1581
  • [5] Electrochemical studies of the hemin-DNA interaction
    Qu, F
    Zhu, ZW
    Li, NQ
    ELECTROANALYSIS, 2000, 12 (11) : 831 - 835
  • [6] DNA-grafted hemin with preferable catalytic properties than G-quadruplex/hemin for fluorescent miRNA biosensing
    Li, Jia
    Yuan, Taixian
    Yang, Tiantian
    Xu, Lulu
    Zhang, Lutan
    Huang, Lizhen
    Cheng, Wei
    Ding, Shijia
    SENSORS AND ACTUATORS B-CHEMICAL, 2018, 271 : 239 - 246
  • [7] Interaction of a copper cationic porphyrin with quadruplex DNA
    Butterworth, Andrew
    Azam, Mahrukh
    FASEB JOURNAL, 2007, 21 (05): : A262 - A262
  • [8] Interaction of an acridine dimer with DNA quadruplex structures
    Alberti, P
    Ren, JS
    Teulade-Fichou, MP
    Guittat, L
    Riou, JF
    Chaires, JB
    Hélène, C
    Vigneron, JP
    Lehn, JM
    Mergny, JL
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2001, 19 (03): : 505 - 513
  • [9] Effect of Metal ions and Buffers on the G-quadruplex structures of PS2.M, a catalytic DNA, and its interaction with Hemin
    Majhi, PR
    Shafer, RH
    BIOPHYSICAL JOURNAL, 2005, 88 (01) : 58A - 58A
  • [10] Volumetric analysis of formation of the complex of G-quadruplex DNA with hemin using high pressure
    Takahashi, Shuntaro
    Bhowmik, Sudipta
    Sugimoto, Naoki
    JOURNAL OF INORGANIC BIOCHEMISTRY, 2017, 166 : 199 - 207