Overproduction, crystallization and preliminary X-ray crystallographic analysis of Escherichia coli tRNA N6-threonylcarbamoyladenosine dehydratase

被引:3
|
作者
Kim, Sunmin [1 ]
Kim, Keon Young [1 ]
Park, Jeong Kuk [1 ]
Lee, Byung Il [2 ]
Kim, Yun-Gon [3 ]
Park, SangYoun [1 ]
机构
[1] Soongsil Univ, Sch Syst Biomed Sci, Seoul 156743, South Korea
[2] Natl Canc Ctr, Res Inst, Div Convergence Technol, Biomol Funct Res Branch, Goyang 410769, Gyeonggi, South Korea
[3] Soongsil Univ, Dept Chem Engn, Seoul 156743, South Korea
关键词
PROTEIN; ACID;
D O I
10.1107/S2053230X14020883
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Escherichia coli tRNA N-6-threonylcarbamoyladenosine dehydratase (TcdA), previously called CsdL or YgdL, was overproduced and purified from E. coli and crystallized using polyethylene glycol 3350 as a crystallizing agent. X-ray diffraction data were collected to 2.70 angstrom resolution under cryoconditions using synchrotron X-rays. The crystals belonged to space group P2(1), with unit-cell parameters a = 65.4, b = 96.8, c = 83.3 angstrom, beta = 111.7 degrees. According to the Matthews coefficient, the asymmetric unit may contain up to four subunits of the monomeric protein, with a crystal volume per protein mass (V-M) of 2.12 angstrom(3) Da(-1) and 42.1% solvent content.
引用
收藏
页码:1517 / 1520
页数:4
相关论文
共 50 条
  • [1] Crystallization and preliminary X-ray crystallographic analysis of Escherichia coli CusB
    Xu, Yongbin
    Yun, Bo-Young
    Sim, Se-Hoon
    Lee, Kangseok
    Ha, Nam-Chul
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2009, 65 : 743 - 745
  • [2] Crystallization and preliminary X-ray crystallographic analysis of YgjG from Escherichia coli
    Yeo, Seung-Joo
    Jeong, Jae-Hee
    Yu, Sun-Nam
    Kim, Yeon-Gil
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2012, 68 : 1070 - 1072
  • [3] Crystallization and preliminary X-ray analysis of Escherichia coli peptidyl-tRNA hydrolase
    Schmitt, E
    Fromant, M
    Plateau, P
    Mechulam, Y
    Blanquet, S
    [J]. PROTEINS-STRUCTURE FUNCTION AND GENETICS, 1997, 28 (01): : 135 - 136
  • [4] Crystallization and preliminary X-ray crystallographic analysis of thioesterase I from Escherichia coli
    Lo, YC
    Lee, YL
    Shaw, JF
    Liaw, YC
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2000, 56 : 756 - 757
  • [5] Crystallization and preliminary X-ray crystallographic analysis of the Pseudomonas aeruginosa cyclohexadienyl dehydratase
    Kongsaeree, P
    Liang, J
    Jensen, RA
    Clardy, J
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 1999, 55 : 539 - 541
  • [6] Crystallization and preliminary X-ray crystallographic studies of Escherichia coli xanthine phosphoribosyltransferase
    Vos, S
    deJersey, J
    Martin, JL
    [J]. JOURNAL OF STRUCTURAL BIOLOGY, 1996, 116 (02) : 330 - 334
  • [7] Crystallization and preliminary X-ray crystallographic studies of HsIU mutant in Escherichia coli
    Song, JJ
    Lee, CS
    Kim, YS
    Kim, JJ
    Im, YJ
    Kim, HH
    Yoo, SJ
    Seong, IS
    Chung, CH
    Eom, SH
    [J]. BULLETIN OF THE KOREAN CHEMICAL SOCIETY, 2000, 21 (07) : 747 - 748
  • [8] Crystallization and preliminary X-ray crystallographic analysis of FlhD/FlhC complex from Escherichia coli
    Wang, SY
    Matsumura, P
    Westbrook, EM
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2001, 57 : 734 - 736
  • [9] Crystallization and preliminary X-ray crystallographic analysis of a yedU gene product from Escherichia coli
    Kim, OG
    Kim, IK
    Kim, GH
    Ko, JS
    Park, C
    Suh, PG
    Kang, SO
    Lee, HS
    Cha, SS
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2002, 58 : 1217 - 1219
  • [10] Crystallization and preliminary X-ray crystallographic analysis of a ytfG gene product from Escherichia coli
    Kim, IK
    Yim, HS
    Kim, DW
    Kim, YM
    Lee, HS
    Cha, SS
    Kang, SO
    [J]. ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY, 2004, 60 : 365 - 367