TCGA-Assembler: open-source software for retrieving and processing TCGA data

被引:298
|
作者
Zhu, Yitan [1 ]
Qiu, Peng [2 ,3 ]
Ji, Yuan [1 ,4 ]
机构
[1] NorthShore Univ HealthSyst, Ctr Biomed Res Informat, Evanston, IL 60201 USA
[2] Georgia Inst Technol, Wallace H Coulter Dept Biomed Engn, Atlanta, GA 30332 USA
[3] Emory Univ, Atlanta, GA 30322 USA
[4] Univ Chicago, Dept Hlth Studies, Chicago, IL 60637 USA
关键词
D O I
10.1038/nmeth.2956
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:599 / 600
页数:2
相关论文
共 50 条
  • [21] Medical Subject Headings (MeSH) for indexing and retrieving open-source healthcare data
    Marc, David T.
    Khairat, Saif S.
    [J]. INTEGRATING INFORMATION TECHNOLOGY AND MANAGEMENT FOR QUALITY OF CARE, 2014, 202 : 157 - 160
  • [22] Open-source software for repositories
    Vasilyeva, Natalya V.
    [J]. NAUCHNYE I TEKHNICHESKIE BIBLIOTEKI-SCIENTIFIC AND TECHNICAL LIBRARIES, 2023, (03): : 102 - 119
  • [23] Robust open-source software
    Neumann, PG
    [J]. COMMUNICATIONS OF THE ACM, 1999, 42 (02) : 128 - 128
  • [24] OPEN-SOURCE SOFTWARE IN ROBOTICS
    Timoftei, Sanda
    Brad, Emilia
    Sarb, Anca
    Stan, Ovidiu
    [J]. ACTA TECHNICA NAPOCENSIS SERIES-APPLIED MATHEMATICS MECHANICS AND ENGINEERING, 2018, 61 (03): : 519 - 526
  • [25] PuPl: an open-source tool for processing pupillometry data
    Kinley, Isaac
    Levy, Yarden
    [J]. BEHAVIOR RESEARCH METHODS, 2022, 54 (04) : 2046 - 2069
  • [26] Processing binding data using an open-source workflow
    Samuel, Errol L. G.
    Holmes, Secondra L.
    Young, Damian W.
    [J]. JOURNAL OF CHEMINFORMATICS, 2021, 13 (01)
  • [27] PuPl: an open-source tool for processing pupillometry data
    Isaac Kinley
    Yarden Levy
    [J]. Behavior Research Methods, 2022, 54 : 2046 - 2069
  • [28] Processing binding data using an open-source workflow
    Errol L. G. Samuel
    Secondra L. Holmes
    Damian W. Young
    [J]. Journal of Cheminformatics, 13
  • [29] EMagPy: Open-source standalone software for processing, forward modeling and inversion of electromagnetic induction data
    McLachlan, Paul
    Blanchy, Guillaume
    Binley, Andrew
    [J]. COMPUTERS & GEOSCIENCES, 2021, 146
  • [30] ESP3: An open-source software for the quantitative processing of hydro-acoustic data
    Ladroit, Yoann
    Escobar-Flores, Pablo C.
    Schimel, Alexandre Cg
    O'Driscoll, Richard L.
    [J]. SOFTWAREX, 2020, 12