Cultivar discrimination/segregation of representative Australian malting barley by quantitative real-time PCR using seed hordein marker

被引:1
|
作者
Cai, Guolin [2 ,3 ]
You, Lihua [2 ,3 ]
Li, Xiaomin [2 ,3 ]
Wu, Dianhui [2 ,3 ]
Lu, Jian [1 ,2 ,3 ]
机构
[1] Jiangnan Univ Suqian, Ind Technol Res Inst, 888 Renmin Rd, Suqian 223800, Peoples R China
[2] Jiangnan Univ, Sch Biotechnol, Minist Educ, Key Lab Ind Biotechnol, 1800 Lihu Rd, Wuxi 214122, Jiangsu, Peoples R China
[3] Jiangnan Univ, Natl Engn Lab Cereal Fermentat Technol, 1800 Lihu Rd, Wuxi 214122, Jiangsu, Peoples R China
基金
国家高技术研究发展计划(863计划);
关键词
malting barley variety; beer; hordein; two-dimensional electrophoresis; quantitative real-time PCR; POLYACRYLAMIDE GEL-ELECTROPHORESIS; FLIGHT MASS-SPECTROMETRY; PROTEOME ANALYSIS; IDENTIFICATION; VARIETIES; PROTEINS; QUALITY;
D O I
10.1002/jib.367
中图分类号
TS2 [食品工业];
学科分类号
0832 ;
摘要
The malting barley cultivar greatly affects the quality traits of malt, and thus that of final beer product. A fast, sensitive and quantitative method of barley variety discrimination is needed for maltsters. In the present study, six commonly used varieties in Chinese brewing industry, including the Australia malting barley varieties (Gairdner, Baudin, Hindmarsh and Vlamingh) and Chinese ones (Supi6 and Kenpi7) were selected for new method development. A two-dimensional electrophoresis profile of seed hordeins was obtained to explore the representative markers of each variety. By comparing the hordein profiles, 43 common spots and 14 specific spots that presented in only one barley cultivar gel were investigated and identified bymatrix-assisted laser desorption/ionization time-of-flight. The blended Gairdner barley samples with a series of purity degrees were obtained by artificial mixing Gairdner seeds with those of Supi6 and Kenpi7 in the laboratory. Standard curves regarding the transcriptional level of hordein marker BMAI-1 to the variety purity of Gairdner were set using quantitative real-time PCR (qRT-PCR). Finally, the developed method based on qRT-PCR was shown to be accurate and time-saving compared with the conventional SDS-PAGE method by a double blind experiment. Copyright (C) 2016 The Institute of Brewing & Distilling
引用
收藏
页码:700 / 705
页数:6
相关论文
共 50 条
  • [41] Quantitative Genotyping for the Astringency Locus in Hexaploid Persimmon Cultivars using Quantitative Real-time PCR
    Akagi, Takashi
    Takeda, Yumi
    Yonemori, Keizo
    Ikegami, Ayako
    Kono, Atsushi
    Yamada, Masahiko
    Kanzaki, Shinya
    JOURNAL OF THE AMERICAN SOCIETY FOR HORTICULTURAL SCIENCE, 2010, 135 (01) : 59 - 66
  • [42] A Rapid FRET Real-Time PCR Protocol for Simultaneous Quantitative Detection and Discrimination of Human Plasmodium Parasites
    Schneider, Renate
    Lamien-Meda, Aline
    Auer, Herbert
    Wiedermann-Schmidt, Ursula
    Chiodini, Peter L.
    Walochnik, Julia
    BIO-PROTOCOL, 2022, 12 (07):
  • [43] Diagnosis of feline haemoplasma infection in Australian cats using a real-time PCR assay
    Tasker, S
    Braddock, JA
    Baral, R
    Helps, CR
    Day, MJ
    Gruffydd-Jones, TJ
    Malik, R
    JOURNAL OF FELINE MEDICINE AND SURGERY, 2004, 6 (06) : 345 - 354
  • [44] A real-time, quantitative PCR seed assay for Botrytis spp. that cause neck rot of onion
    Chilvers, Martin I.
    du Toit, Lindsey J.
    Akamatsu, Hajime
    Peever, Tobin L.
    PLANT DISEASE, 2007, 91 (05) : 599 - 608
  • [45] The reliable detection of Barley yellow and mild mosaic viruses using real-time PCR (TaqMan®)
    Mumford, R
    Skelton, A
    Metcalfe, E
    Walsh, K
    Boonham, N
    JOURNAL OF VIROLOGICAL METHODS, 2004, 117 (02) : 153 - 159
  • [46] A quantitative real-time PCR assay for the detection of Ramularia collo-cygni from barley (Hordeum vulgare)
    Taylor, J. M. G.
    Paterson, L. J.
    Havis, N. D.
    LETTERS IN APPLIED MICROBIOLOGY, 2010, 50 (05) : 493 - 499
  • [47] A quantitative real-time PCR assay for Ehrlichia ruminantium using pCS20
    Steyn, H. C.
    Pretorius, A.
    McCrindle, C. M. E.
    Steinmann, C. M. L.
    Van Kleef, M.
    VETERINARY MICROBIOLOGY, 2008, 131 (3-4) : 258 - 265
  • [48] Identification of Recombinant Alleles Using Quantitative Real-Time PCR Implications for Gaucher Disease
    Velayati, Arash
    Knight, Melanie A.
    Stubblefield, Barbara K.
    Sidransky, Ellen
    Tayebi, Nahid
    JOURNAL OF MOLECULAR DIAGNOSTICS, 2011, 13 (04): : 401 - 405
  • [49] Quantitative detection of probiotic Bifidobacterium strains in bacterial mixtures by using real-time PCR
    Vitali, B
    Candela, M
    Matteuzzi, D
    Brigidi, P
    SYSTEMATIC AND APPLIED MICROBIOLOGY, 2003, 26 (02) : 269 - 276
  • [50] In-field distribution of Plasmodiophora brassicae measured using quantitative real-time PCR
    Wallenhammar, A-C.
    Almquist, C.
    Soderstrom, M.
    Jonsson, A.
    PLANT PATHOLOGY, 2012, 61 (01) : 16 - 28