Genome organization and mRNA structure of Periplaneta fuliginosa densovirus imply alternative splicing involvement in viral gene expression

被引:35
|
作者
Yamagishi, J
Hu, Y
Zheng, J
Bando, H [1 ]
机构
[1] Hokkaido Univ, Grad Sch Agr, Div Appl Biosci, Sapporo, Hokkaido 060, Japan
[2] Wuhan Univ, Dept Virol, Inst Virol, Wuhan 430072, Peoples R China
关键词
D O I
10.1007/s007050050626
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
We determined the complete nucleotide sequence of an infectious clone of the cockroach small spherical virus (CSSV) genome. Analysis of the genome organization and the predicted viral protein sequences showed clearly that this virus should be classified as a new member of the subfamily Densovirinae, genus Densovirus, and should be designated as PfDNV. However, our data revealed some differences between the gene expression strategies used by PfDNV and other DNVs. An internal promoter, in addition to the promoter (p3) at the genome terminus, was observed at map unit 18 (p18), implying transcriptional regulation of generation of the nonstructural proteins of PfDNV. Furthermore, the structural analysis of cDNAs complementary to mRNAs from the region coding for structural proteins suggested alternative splicing and polyadenylation as means for generation of the structural proteins of PfDNV.
引用
收藏
页码:2111 / 2124
页数:14
相关论文
共 50 条
  • [21] Alternative splicing and nonsense-mediated mRNA decay regulate mammalian ribosomal gene expression
    Cuccurese, M
    Russo, G
    Russo, A
    Pietropaolo, C
    NUCLEIC ACIDS RESEARCH, 2005, 33 (18) : 5965 - 5977
  • [22] Regulation of alternative RNA splicing by exon definition and exon sequences in viral and mammalian gene expression
    Zheng, ZM
    JOURNAL OF BIOMEDICAL SCIENCE, 2004, 11 (03) : 278 - 294
  • [23] The Structure of the Periostin Gene, Its Transcriptional Control and Alternative Splicing, and Protein Expression
    Kudo, Akira
    PERIOSTIN, 2019, 1132 : 7 - 20
  • [24] Human cystathionine beta-synthase: gene organization and expression of different 5' alternative splicing
    Chasse, JF
    Paul, V
    Escanez, R
    Kamoun, P
    London, J
    MAMMALIAN GENOME, 1997, 8 (12) : 917 - 921
  • [25] Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array
    Gardina, Paul J.
    Clark, Tyson A.
    Shimada, Brian
    Staples, Michelle K.
    Yang, Qing
    Veitch, James
    Schweitzer, Anthony
    Awad, Tarif
    Sugnet, Charles
    Dee, Suzanne
    Davies, Christopher
    Williams, Alan
    Turpaz, Yaron
    BMC GENOMICS, 2006, 7 (1)
  • [26] Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array
    Paul J Gardina
    Tyson A Clark
    Brian Shimada
    Michelle K Staples
    Qing Yang
    James Veitch
    Anthony Schweitzer
    Tarif Awad
    Charles Sugnet
    Suzanne Dee
    Christopher Davies
    Alan Williams
    Yaron Turpaz
    BMC Genomics, 7
  • [27] Alternative splicing and nonsense-mediated mRNA decay regulate gene expression of serum response factor
    Zhang, Xiaomin
    Azhar, Gohar
    Huang, Chris
    Cui, Cunqi
    Zhong, Ying
    Huck, Sylvie
    Wei, Jeanne Y.
    GENE, 2007, 400 (1-2) : 131 - 139
  • [28] Genomic organization, alternative splicing and tissues expression of porcine CREB3L4 gene
    Qi, Y. M.
    Lei, T.
    Zhou, L.
    Chen, X. D.
    Long, Q. Q.
    Long, H.
    Jin, D.
    Gan, L.
    Yang, Z. Q.
    MOLECULAR BIOLOGY REPORTS, 2009, 36 (07) : 1881 - 1888
  • [29] Complete cDNA sequence, expression, alternative splicing, and genomic organization of the mouse Nfat5 gene
    Dalski, A
    Hebinck, A
    Winking, H
    Butzmann, U
    Schwinger, E
    Zühlke, C
    CYTOGENETIC AND GENOME RESEARCH, 2002, 97 (3-4) : 179 - 182
  • [30] Gene structure, multiple alternative splicing, and expression in gonads of zebrafish Dmrt1
    Guo, YQ
    Cheng, HH
    Huang, X
    Gao, S
    Yu, HS
    Zhou, RJ
    BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, 2005, 330 (03) : 950 - 957