Exploration of Artificial Intelligence Use with ARIES in Multiple Myeloma Research

被引:10
|
作者
Loda, Sophia [1 ]
Krebs, Jonathan [2 ]
Danhof, Sophia [1 ]
Schreder, Martin [3 ]
Solimando, Antonio G. [4 ]
Strifler, Susanne [1 ]
Rasche, Leo [1 ]
Kortuem, Martin [1 ]
Kerscher, Alexander [5 ]
Knop, Stefan [1 ]
Puppe, Frank [2 ]
Einsele, Hermann [1 ]
Bittrich, Max [1 ]
机构
[1] Univ Hosp Wurzburg, Dept Internal Med 2, D-97080 Wurzburg, Germany
[2] Univ Wurzburg, Chair Artificial Intelligence & Appl Informat, D-97070 Wurzburg, Germany
[3] Wilheminen Hosp, Med Dept 1, A-1160 Vienna, Austria
[4] Univ Bari, Med Sch Bari, Sect Internal Med G Baccelli, Dept Biomed Sci & Human Oncol, I-70124 Bari, Italy
[5] Comprehens Canc Ctr, D-97080 Wurzburg, Germany
来源
JOURNAL OF CLINICAL MEDICINE | 2019年 / 8卷 / 07期
关键词
natural language processing; ontology; artificial intelligence; multiple myeloma; real world evidence; INFORMATION EXTRACTION; ONCOLOGY; CLASSIFICATION; GENERATION;
D O I
10.3390/jcm8070999
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Background: Natural language processing (NLP) is a powerful tool supporting the generation of Real-World Evidence (RWE). There is no NLP system that enables the extensive querying of parameters specific to multiple myeloma (MM) out of unstructured medical reports. We therefore created a MM-specific ontology to accelerate the information extraction (IE) out of unstructured text. Methods: Our MM ontology consists of extensive MM-specific and hierarchically structured attributes and values. We implemented A Rule-based Information Extraction System (ARIES) that uses this ontology. We evaluated ARIES on 200 randomly selected medical reports of patients diagnosed with MM. Results: Our system achieved a high F1-Score of 0.92 on the evaluation dataset with a precision of 0.87 and recall of 0.98. Conclusions: Our rule-based IE system enables the comprehensive querying of medical reports. The IE accelerates the extraction of data and enables clinicians to faster generate RWE on hematological issues. RWE helps clinicians to make decisions in an evidence-based manner. Our tool easily accelerates the integration of research evidence into everyday clinical practice.
引用
收藏
页数:10
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