Comparison of separation performance of independent component analysis algorithms for fMRI data

被引:3
|
作者
Sariya, Yogesh Kumar [1 ]
Anand, R. S. [1 ]
机构
[1] Indian Inst Technol Roorkee, Instrumentat & Signal Proc Grp, Dept Elect Engn, Roorkee 247667, Uttar Pradesh, India
关键词
Brain; blood oxygenation level dependent signals; blind source separation; spatial sorting; temporal sorting; mutual information; resting state networks; STATE FUNCTIONAL CONNECTIVITY; STRUCTURAL CONNECTIVITY; MRI; TOOLBOX; NETWORK; ICA;
D O I
10.3233/JIN-170006
中图分类号
Q189 [神经科学];
学科分类号
071006 ;
摘要
Independent component analysis, a data-driven analysis method, has found significant applications in task-based as well as resting state fMRI studies. There are numbers of independent component analysis algorithms available, but only a few of them have been used frequently so far for fMRI images. With a view that algorithms that are overlooked may outperform the most opted, a comparative study is taken up in this paper to analyze their abilities for the purpose of synthesis of fMRI images. In this paper, ten independent component algorithms: Fast ICA, INFOMAX, SIMBEC, JADE, ERICA, EVD, RADICAL, ICA-EBM, ERBM, and COMBI are compared. Their separation abilities are adjudged on both, synthetic and real fMRI images. Performance to decompose synthetic fMRI images is being monitored on the basis of spatial correlation coefficients, time elapsed to extract independent components and the visual appearance of independent components. Ranking of their performances on task-based real fMRI images are based on the closeness of time courses of identified independent components with model time course and the closeness of spatial maps of components with spatial templates while their competencies for resting state fMRI data are analyzed by examining how distinctly they decompose the data into the most consistent resting state networks. Sum of mutual information between all the permutations of decomposed components of resting state fMRI data are also calculated.
引用
收藏
页码:157 / 175
页数:19
相关论文
共 50 条
  • [31] Sparse Independent Component Analysis with an Application to Cortical Surface fMRI Data in Autism
    Wang, Zihang
    Gaynanova, Irina
    Aravkin, Aleksandr
    Risk, Benjamin B.
    [J]. JOURNAL OF THE AMERICAN STATISTICAL ASSOCIATION, 2024,
  • [32] Independent component analysis applied to fMRI data: A generative model for validating results
    Calhoun, V
    Pearlson, G
    Adali, T
    [J]. JOURNAL OF VLSI SIGNAL PROCESSING SYSTEMS FOR SIGNAL IMAGE AND VIDEO TECHNOLOGY, 2004, 37 (2-3): : 281 - 291
  • [33] Independent component analysis applied to fMRI data: A generative model for validating results
    Calhoun, V
    Adali, T
    Pearlson, G
    [J]. NEURAL NETWORKS FOR SIGNAL PROCESSING XI, 2001, : 509 - 518
  • [34] Independent Component Analysis Applied to fMRI Data: A Generative Model for Validating Results
    V. Calhoun
    G. Pearlson
    T. Adali
    [J]. Journal of VLSI signal processing systems for signal, image and video technology, 2004, 37 : 281 - 291
  • [35] Spatial independent component analysis of multitask-related activation in fMRI data
    Long, ZY
    Yao, L
    Zhao, XJ
    Pei, LQ
    Xue, G
    Dong, Q
    Peng, DL
    [J]. ARTIFICIAL NEURAL NETWORKS AND NEURAL INFORMATION PROCESSING - ICAN/ICONIP 2003, 2003, 2714 : 515 - 522
  • [36] A Class of Bounded Component Analysis Algorithms for the Separation of Both Independent and Dependent Sources
    Erdogan, Alper T.
    [J]. IEEE TRANSACTIONS ON SIGNAL PROCESSING, 2013, 61 (22) : 5730 - 5743
  • [37] Source density-driven independent component analysis approach for fMRI data
    Hong, BM
    Pearlson, GD
    Calhoun, VD
    [J]. HUMAN BRAIN MAPPING, 2005, 25 (03) : 297 - 307
  • [38] Decentralized temporal independent component analysis: Leveraging fMRI data in collaborative settings
    Baker, Bradley T.
    Abrol, Anees
    Silva, Rogers F.
    Damaraju, Eswar
    Sarwate, Anand D.
    Calhoun, Vince D.
    Plis, Sergey M.
    [J]. NEUROIMAGE, 2019, 186 : 557 - 569
  • [39] A Parcellation Based Nonparametric Algorithm for Independent Component Analysis with Application to fMRI Data
    Li, Shanshan
    Chen, Shaojie
    Yue, Chen
    Caffo, Brian
    [J]. FRONTIERS IN NEUROSCIENCE, 2016, 10
  • [40] Independent component analysis in the presence of noise in fMRI
    Cordes, Dietmar
    Nandy, Rajesh
    [J]. MAGNETIC RESONANCE IMAGING, 2007, 25 (09) : 1237 - 1248