Description of Klebsiella africanensis sp. nov., Klebsiella variicola subsp. tropicalensis subsp. nov. and Klebsiella variicola subsp. variicola subsp. nov

被引：62
|
作者：
Rodrigues, Carla [1 ]
Passet, Virginie [1 ]
Rakotondrasoa, Andriniaina [2 ]
Diallo, Thierno Abdoulaye [3 ]
Criscuolo, Alexis [4 ]
Brisse, Sylvain [1 ]
机构：
[1] Inst Pasteur, Biodivers & Epidemiol Bacterial Pathogens, Paris, France
[2] Inst Pasteur Madagascar, Antananarivo, Madagascar
[3] Inst Pasteur, Dakar, Senegal
[4] Inst Pasteur, Hub Bioinformat & Biostat C3BI, USR 3756, CNRS, Paris, France
来源：
RESEARCH IN MICROBIOLOGY | 2019年 / 170卷 / 03期
基金：
欧盟地平线“2020”;
关键词：
Klebsiella pneumoniae complex; Phylogeny; Taxonomy; Genome sequencing; Beta-lactamase; Human carriage; CHROMOSOMAL BETA-LACTAMASE; 16S RDNA; PNEUMONIAE; DIVERSITY; INFECTIONS; PLANT;
D O I：
10.1016/j.resmic.2019.02.003
中图分类号：
Q93 [微生物学];
学科分类号：
071005 ; 100705 ;
摘要：
The bacterial pathogen Klebsiella pneumoniae comprises several phylogenetic groups (Kp1 to Kp7), two of which (Kp5 and Kp7) have no taxonomic status. Here we show that group Kp5 is closely related to Klebsiella variicola (Kp3), with an average nucleotide identity (ANI) of 96.4%, and that group Kp7 has an ANI of 94.7% with Kp1 (K. pneumoniae sensu stricto). Biochemical characteristics and chromosomal beta-lactamase genes also distinguish groups Kp5 and Kp7 from other Klebsiella taxa. We propose the names Klebsiella africanensis for Kp7 (type strain, 200023(T) = CIP 111653(T)) and K. variicola subsp. tropicalensis for Kp5 (type strain, 1266(T) = CIP 111654(T)). (C) 2019 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.
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收藏
页码：165 / 170
页数：6
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